Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1676 ATGACAATTGAAGAAGTAATTAGTGAATGCAAATTATTCTACTTAGCAGGGCAAGAGACCACTTCATCTCTGCTGGTTTGGACATTGATCATGTTGAGTAAATATCCTGACTGGCAAGCACGAGCAAGGGAGGCAGTTCTTCACGTTTTTGGAAAACAAAATCCAAACTTTGATGGGTTAAGTCTGCTTAAAACTAAGGACATGGAACTTGGAAACCTGTCACTACCCGCAGGAGTAGATGTTACCATGCCAATACTTTTATTTCACAAGGATGGTGATATCTGGGGTAATGATGCAAAGGAATTCAAACCAGGAAGGTTATCTGAAGGAGTTGCTAAAGCAACAAAAGGCCAAATCTCATTTTACCCATTTGGATGCGGTCCTAGAATTTGCATTGGCCAAAACTTTGCCATGTTGGAAGCCAAAATAGTGTTGTCATTGCTTCTGCAGAATTTCTCGTTCGAGCTTTCTCCTGTCTATGCACATGCTCCTGTACTTAAGCTTAGCTTGAATCCCAAATTGGGAGCGCCTCTTATTTTGCAAAAACTATGA 552 0.4076 MTIEEVISECKLFYLAGQETTSSLLVWTLIMLSKYPDWQARAREAVLHVFGKQNPNFDGLSLLKTKDMELGNLSLPAGVDVTMPILLFHKDGDIWGNDAKEFKPGRLSEGVAKATKGQISFYPFGCGPRICIGQNFAMLEAKIVLSLLLQNFSFELSPVYAHAPVLKLSLNPKLGAPLILQKL* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1676 183 Gene3D Cytochrome P450 1 64 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 Gene3D Cytochrome P450 65 183 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PANTHER CYTOCHROME P450 FAMILY MEMBER 65 173 - -
Pvu11g1676 183 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 66 - -
Pvu11g1676 183 PRINTS E-class P450 group I signature 5 22 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PRINTS E-class P450 group I signature 25 51 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PRINTS E-class P450 group I signature 121 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PRINTS E-class P450 group I signature 131 154 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PANTHER CYTOCHROME P450 72A11-RELATED 65 173 - -
Pvu11g1676 183 PANTHER CYTOCHROME P450 72A11-RELATED 1 66 - -
Pvu11g1676 183 PRINTS P450 superfamily signature 16 33 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PRINTS P450 superfamily signature 122 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 PRINTS P450 superfamily signature 131 142 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 124 133 IPR017972 GO:0005506|GO:0016705
Pvu11g1676 183 Pfam Cytochrome P450 65 165 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 Pfam Cytochrome P450 1 61 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu11g1676 183 SUPERFAMILY Cytochrome P450 1 180 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1676 Pvu-Chr11 42496849 42497559 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1676 1 183 Cytochrome P450 AT3G14680 53.883 1.05e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1676 - K17873 pvu:PHAVU_011G161600g 369.777
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1676 11 42496849 42497559 Pvu11g1676 11 42496849 42497559 ECH
Pvu11g1676 11 42496849 42497559 Pvu5g0655 5 9234050 9237110 PCT