Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1639 ATGTTCCCATTGCATCCTAATAAAAACAAAATCATTCGACCTGTGATCAAACAACTCATCATGGACCAGAACAACACTGTTCCAAGAATTCATGCATTCTCAGCAGCAGCACCACCTTCCCCTCCCATGTTTTCCTTCATCATTGCTCTTTCCATCGCAGCACTAATTTTCATGTGCTTCCACGTTTTCTCAGGCATTGCTTCAGCAGCCATTCTTCTAGCCCTTTGCATCACCACCCTCTTCCTTTGCAGGTTTACGCATGATCGCGAATTGAGAGAAGCAGCCTCTTTTCATGCACAAACTCCACAGAATAACCACAGGGTGGTGAAAATTCTCAATAAGCTTTTCTGGGTTGTTGAGTACAAAAGGGGTGGCCAAAGGCAACAAGTCAAGAAGCTGCTTGGATCAATTGTGTGCTTTGAAAACCAAGCATTGGTATCAGGGAGTGAATGTGCTATTTGCTTGGAAGAGTTCAAGAAGGGAGAAAAGTGCCTTGTGTTCTCATTTTGTGGCCACACCTTCCACTGTGACTGTATCAACACCTGGTTTGAGGAAAAACCCACTTGCCCAAATTGCCGTTATGTGCCATCAGCCACCATAACCTCTGTTGACATCAAAACATATCAGTTTACAATTTGA 639 0.4382 MFPLHPNKNKIIRPVIKQLIMDQNNTVPRIHAFSAAAPPSPPMFSFIIALSIAALIFMCFHVFSGIASAAILLALCITTLFLCRFTHDRELREAASFHAQTPQNNHRVVKILNKLFWVVEYKRGGQRQQVKKLLGSIVCFENQALVSGSECAICLEEFKKGEKCLVFSFCGHTFHCDCINTWFEEKPTCPNCRYVPSATITSVDIKTYQFTI* 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1639 212 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 198 IPR013083 -
Pvu11g1639 212 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 5 199 - -
Pvu11g1639 212 PANTHER RING-H2 FINGER PROTEIN ATL61-RELATED-RELATED 5 199 - -
Pvu11g1639 212 SMART ring_2 151 192 IPR001841 -
Pvu11g1639 212 Pfam Ring finger domain 150 193 IPR001841 -
Pvu11g1639 212 ProSiteProfiles Zinc finger RING-type profile. 151 193 IPR001841 -
Pvu11g1639 212 SUPERFAMILY RING/U-box 139 196 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1639 70 193 C3H Transcription Factor Family AT3G10910 30.000 2.43e-13 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1639 - K15692 vra:111240582 234.572