Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1577 ATGGCACTTCTTCCAGCTATGTTTCTTTCCCTAAACCTACTATTTTTTCTCTCTCAAATTTCCCATGCAACTGACACCATTTCTAAGTCCCAACCACTTCTTAATGGAAGCACCTTGGTCTCCAAAGATGGAACCTTCGAGTTGGGTTTCTTCACTCCCGGTAGTTCCACAAACAGCTACGTTGGAATCTGGTTCAAGAACATTCCAGTTAGAACCGTGGTTTGGGTTGCCAACCGTGACAACCCTTCAAAACATAAATCCAACATGTTGTCTCTAAACAAAGAGGGAAACCTCGTACTTCTCAGCCAAAACCGGTCTGTTGTTTGGTCGACAAATGCAACAACAATGGTTTTGAATCCCGTTGTGCAACTTTTAGACAATGGAAATTTAGTGATTAGAGATGAGAAGGATAACAGCAACAGTGAAGATAGTTTTGTGTGGCAGAGCTTTGACCATCCTTGTGATACACTCTTGCAAGGAATGAAGTTGGGGTGGAACCTTAAAACTGGTCTCAATAGGTATCTTAGAGCTTGGAAAAGTTGGGATGACCCTTCTTCCGGAGATTTTACTTCTGGTGTGAAGCTTGGGGTCAATCCTGAATTGGTAATATGGAAAGGCTCGGTTGAGTACTATCGTAGTGGTCCTTGGAATGGGATTTTTTCTAGTGGGGTATTTGGTTTCAGTCCAAATCCACTTTTTGATTATAAACATGTTCAGAATGAAGATGAAGTGTATGTTAGGTACACTCTGAAGAATAGCTCTGTGATTTCTATAATTGTTTTGAACCAAACCCTTTATCTTCGCCAACGCATTACATGGATTCCTCACACAAGAACTTGGAGTGTGTACCAATCCCTGCCACAGGACAGTTGTGATGTTTACAATGTTTGTGGTGCATATGGGAGTTGTGTGATTAACGCGTCCCCAGTGTGTGCATGCTTGGAGGGGTTCAAGCCAAAATCACCCCAAGATTGGAATCAAATGGATTGGACACAAGGGTGTGTGCATAGTGAACCATTGAGTTGTGGAGTCAAAAATAGAGATGGGTTTCGTAAAATTGCTGGGATGAAAATGCCGGATACCTCACATTCTTGGATAAATCAAAGTATGACACTTGAAGATTGCAGGGTCAAATGCTTGGAAAATTGTTCTTGCACTGCTTATGCGAACTTGGACACAAGTGGGGGAGGTAGTGGTTGCTCCATTTGGTTTGGTGATCTTGTTGATCTGAGAGTTTCAGAAAGTGGGCAAGATCTTTATGTTCGAATGGCAACTTCAGATACGGATGCTAAAAATAATAAGCATTCAAAAAAGTTAGTCTCCTTGGTTTCAATCACAGTTTCTCTTGTCCTTCTGGTTCTATTGGCACTCTCCTACATTTTCATGACCAGAAAAAAGTGTAAAGAAAATGGAATATGGACAAAGGAGAAAGATGATGGAGGGCAAGAAAATTTGGAGCTTCCTTTCTTTGATCTTGCAACAATAAGTAATGCCACCAATAACTTCTCAATTGACAACAAGCTTGGTGAAGGTGGTTTTGGACCAGTATACAAGGGTACAATGCTAGATGGACAAGAGATTGCAGTTAAAAGGCTCTCAAGGAGTTCAGGACAAGGATCGAAAGAATTTAAGAATGAAGTTATATTGTGTGCCAAACTTCAACATCGGAATCTTGTCAAGGTTCTTGGTTGTTGCATTGAAGCAGAAGAAAAAATGTTACTCTATGAGTACATGCCAAATAGAAGTCTCGATTCATTTATTTTTGATTCGGAACGAGGTAAACTTCTAGATTGGCCTATGCGCTTTAACATCCTGTCTGCAATTGCACGAGGACTTCTCTATCTTCACCAAGATTCTAGATTAAGAGTCATACATAGAGATTTGAAAGCAAGCAATATTTTATTGGATGATAACATGAATCCAAAAATTTCAGATTTTGGTTTGGCTAAAATGTGTGGAGGTGATCAAGTTGAAGGAAATACAAACAGAATTGTTGGAACATATGGTTATATGGCACCAGAATATGCTCTAGATGGATTATTTTCTACAAAATCAGATGTTTTTAGCTTCGGTGTATTGCTGTTAGAAACAGTTACAGGAAAGAAAAATAGAGCAATTACATGTGAAGAGAATAGTGATAATCTCATTGGACATGCATGGAGAATGTGGAAAAAGGGCATTCCAGAACAAGTGCTTGATGCTAATATAGTGGACTCAAGCAATATATCAGAAGTTGTTCGCTGCATTCAAATTGGTCTTTTATGTTTACAACATCATCCTGAAGATAGACCAAACATGACATCAGTGACTGTAATGTTGAGCAGTGACAGTGTTTTATCTTTACCTAAGGTACCTGGCTTCTTGATAAAGAATATTTCAATTGAAGCCGAGCAATCTTGTGGTAGACAAGAGTCTTGTTCAATCAATGATGTAACTGTGTCATTATTAGATGCTAGATAG 2460 0.3931 MALLPAMFLSLNLLFFLSQISHATDTISKSQPLLNGSTLVSKDGTFELGFFTPGSSTNSYVGIWFKNIPVRTVVWVANRDNPSKHKSNMLSLNKEGNLVLLSQNRSVVWSTNATTMVLNPVVQLLDNGNLVIRDEKDNSNSEDSFVWQSFDHPCDTLLQGMKLGWNLKTGLNRYLRAWKSWDDPSSGDFTSGVKLGVNPELVIWKGSVEYYRSGPWNGIFSSGVFGFSPNPLFDYKHVQNEDEVYVRYTLKNSSVISIIVLNQTLYLRQRITWIPHTRTWSVYQSLPQDSCDVYNVCGAYGSCVINASPVCACLEGFKPKSPQDWNQMDWTQGCVHSEPLSCGVKNRDGFRKIAGMKMPDTSHSWINQSMTLEDCRVKCLENCSCTAYANLDTSGGGSGCSIWFGDLVDLRVSESGQDLYVRMATSDTDAKNNKHSKKLVSLVSITVSLVLLVLLALSYIFMTRKKCKENGIWTKEKDDGGQENLELPFFDLATISNATNNFSIDNKLGEGGFGPVYKGTMLDGQEIAVKRLSRSSGQGSKEFKNEVILCAKLQHRNLVKVLGCCIEAEEKMLLYEYMPNRSLDSFIFDSERGKLLDWPMRFNILSAIARGLLYLHQDSRLRVIHRDLKASNILLDDNMNPKISDFGLAKMCGGDQVEGNTNRIVGTYGYMAPEYALDGLFSTKSDVFSFGVLLLETVTGKKNRAITCEENSDNLIGHAWRMWKKGIPEQVLDANIVDSSNISEVVRCIQIGLLCLQHHPEDRPNMTSVTVMLSSDSVLSLPKVPGFLIKNISIEAEQSCGRQESCSINDVTVSLLDAR* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1577 819 SUPERFAMILY Protein kinase-like (PK-like) 486 778 IPR011009 -
Pvu11g1577 819 SMART blect_4 30 153 IPR001480 -
Pvu11g1577 819 ProSiteProfiles PAN/Apple domain profile. 342 424 IPR003609 -
Pvu11g1577 819 Pfam PAN-like domain 342 410 IPR003609 -
Pvu11g1577 819 Gene3D Hepatocyte Growth Factor 341 424 - -
Pvu11g1577 819 ProSiteProfiles EGF-like domain profile. 287 323 IPR000742 -
Pvu11g1577 819 CDD STKc_IRAK 508 773 - -
Pvu11g1577 819 Gene3D Phosphorylase Kinase; domain 1 476 577 - -
Pvu11g1577 819 Gene3D Transferase(Phosphotransferase) domain 1 578 779 - -
Pvu11g1577 819 PIRSF SRK 1 819 IPR024171 GO:0004674
Pvu11g1577 819 CDD B_lectin 30 153 IPR001480 -
Pvu11g1577 819 Pfam S-locus glycoprotein domain 211 321 IPR000858 GO:0048544
Pvu11g1577 819 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 184 IPR036426 -
Pvu11g1577 819 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 32 813 - -
Pvu11g1577 819 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 32 813 - -
Pvu11g1577 819 Pfam D-mannose binding lectin 72 179 IPR001480 -
Pvu11g1577 819 SMART ntp_6 345 423 IPR003609 -
Pvu11g1577 819 Pfam Domain of unknown function (DUF3403) 774 819 IPR021820 GO:0004674
Pvu11g1577 819 Gene3D - 17 150 IPR036426 -
Pvu11g1577 819 CDD PAN_AP_plant 339 424 - -
Pvu11g1577 819 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Pvu11g1577 819 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1577 819 Pfam Protein tyrosine and serine/threonine kinase 503 770 IPR001245 GO:0004672|GO:0006468
Pvu11g1577 819 SMART serkin_6 502 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1577 819 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1577 Pvu-Chr11 39856252 39859644 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1577 435 791 Receptor kinase-like Gene Family AT4G23230 53.073 1.19e-124 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1577 PK_Tyr_Ser-Thr 5.1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1577 - - gmx:100790436 1413.67
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0912 5 24303686 24307623 Pvu11g1577 11 39856252 39859644 PCT
Pvu11g1577 11 39856252 39859644 Pvu5g1010 5 28983632 28984637 PCT