Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1576 ATGTTTGAGCATGCTATCAGGCATAAGCTACAGAAGCTGCTTTCTTTCATGTGCTTGTGCTTGTGGTGGAGTACTTGTATTCATGTTGAAGCAGCAAATGACAGTTTAAAGCCTGGTCATACACTGAATTACACAGATATAGCAACATTATGTTCAAAAAAGGGCAAATATTGTCTAGATTTTCAATGGAAGGATGTTGGTGAGAACCAATATTTGGTTGTATCCAGTGCAAATAATAATAAAGTAGTTTGGATGAGTGATAGAAACCAACCTGTTGACGGAGATTCTGCAGTTCTGTCACTTAACCGCTCAGGTGTGCTGAAAATTGAATCTGAACGTAGGAAGCCAATAATCCTGTATTATCCACCTCAACCTATCAACAACATTAAGGCCACCTTGTTGGACACAGGCAATTTTGTGCTTCAACAACTTCACTCCAATGGGACAAACACTCTCTTGTGGCAGAGTTTTGATTATCCCACTGACACTTTGATCCCCACCATGAAGTTAGGTGTTAACCACAAAACAGACCATCATTGGTTACTGGTTTCATTTATGGCCAAAACACTTGTAACTCCCGGTGCCTTTAGCCTTGAATGGGAACCTGTGGAACAAGAATTGATCATAAGAAGACGGGGAAAAGTTTGTTGGAGAAGTGGGAAACTGAGGAACAATAGGTTTGAGCACATTCCAGAGGATGCACAACGCAGGTTGAAGTATACCATTGTGTCTAATGGGGATGAAAACTCCTTCTCTTTCACAACTACAAATGAAGAGGCTGACCTGTGGTGGATTCTCTCAGAAACTGGGCAGATATCTGATGGTAAAGGATACGTTGCAAGGGCTGATTTGTGTTATGGATATAACACAGATGGAGGGTGCCAAAGATGGCAGGATATACCCAAGTGTAGGAATCCTGGTGATGTGTTCCAGAAAAAGACTGGTTACTTCAATTATCTTCTGAATACAAGCATTGAAGGAAATATAAGTTATGGTTACAGTGATTGTGAGGCCAGTTGCTGGAGCAATTGTAATTGCAATGCATTCACAGAATTTTATTCTAATGGAACTGGATGCACATTCTTTCACTGGATTTCCGCGGAAAATTATACTTTTGATAGTACTGGTGAAAACTTTTACTTCCTGGTGAACATGTTAACTAATCATAAGGGTACAAAAAAGTGGATATGGATAGGTGCAGTAGCAGCAACTGCTCTACTTGCAATTTGCCTATTCACTATTTGCCTAGCCTTAAAGAAACGAAAATTCGTGTTTCAAGACAAGAAAAGGCAAAGAATGGTGATGAAGATGGTACATTTGGCAACTTGTAGTCGGTCATCTGCAATGGAAGATTTTGAAGTTGATTTAAAAAAGGGAAATGGCCTAAAATTGTTTAATTATACATCAGTTATGGCAGCAACAAGTGGATTTTCATCTGAGAATATGTTAGGAGAAGGAGGCTTTGGACCCGTTTATAAGGGAATTCTTCTAACAGGCCAAGAGATTGCTGTAAAAAGACTTTCAAAAACATCTGGGCAAGGAATTGTGGAGTTTAAGAATGAACTAACACTAATATGTGAACTTCAGCATATGAATCTTGTGCAACTACTTGGTTGTTGCATTCATGAAGAAGAGAGGATTCTAATTTATGAGTATATGCCAAATAAAAGTTTGGATTTCTATCTATTCGATTCTACAAGAGGAAAATTATTAGATTGGAAGAAACGGTTCAAAATAATAGAAGGAATTTCCCAAGGATTACTTTATCTTCATAAGTACTCAAGACTCAAAATCATCTTGAAAGCTAGCAACATTCTTTTAGATGAAAATATGAATCCAAAAATATCAGATTTTGGGATGGCAAGAATATTCACACAAGAATCAGTCTCAAATACCAATAGAATTGTTGGGACACATGGTTACATGTCTCCAGAATATATTATGGAAGGAGTTTTCTCTACAAAGTCTGACGTTTATAGTTTTGGAGTGTTGCTACTTGAAATTGTTGGTGGAAGAAGAAGCCTTGGTTGCTATGGTGTTGATAGACCATTAAATATGATAGGACATACATGGGAGTTATGGAAAGATGGTGCGTCTTCAGAGTTAGTGGATCCATCAATAAAGGAGTCATTTGATCCTAATGAAGTGCAAAGATGCATTCATATTGGTCTCTTGTGTGTACAACATTATGCAGATGATCGACCAACCATGTCTGACATTGTATCAATGTTGACAAACAAAAGTGAAATAGTTTCCTTACCTGAAAGACCAGCATTCTACGTTGGAAGAAAAATCATTCATCATGAATTATCTTCAAAGGGGTTTTGTGCTGATTCTACAGTAGAGATTACAACATCGACAGTAGAGATTACAACATCTACAATAGACATGACCGATTCCTAA 2403 0.3779 MFEHAIRHKLQKLLSFMCLCLWWSTCIHVEAANDSLKPGHTLNYTDIATLCSKKGKYCLDFQWKDVGENQYLVVSSANNNKVVWMSDRNQPVDGDSAVLSLNRSGVLKIESERRKPIILYYPPQPINNIKATLLDTGNFVLQQLHSNGTNTLLWQSFDYPTDTLIPTMKLGVNHKTDHHWLLVSFMAKTLVTPGAFSLEWEPVEQELIIRRRGKVCWRSGKLRNNRFEHIPEDAQRRLKYTIVSNGDENSFSFTTTNEEADLWWILSETGQISDGKGYVARADLCYGYNTDGGCQRWQDIPKCRNPGDVFQKKTGYFNYLLNTSIEGNISYGYSDCEASCWSNCNCNAFTEFYSNGTGCTFFHWISAENYTFDSTGENFYFLVNMLTNHKGTKKWIWIGAVAATALLAICLFTICLALKKRKFVFQDKKRQRMVMKMVHLATCSRSSAMEDFEVDLKKGNGLKLFNYTSVMAATSGFSSENMLGEGGFGPVYKGILLTGQEIAVKRLSKTSGQGIVEFKNELTLICELQHMNLVQLLGCCIHEEERILIYEYMPNKSLDFYLFDSTRGKLLDWKKRFKIIEGISQGLLYLHKYSRLKIILKASNILLDENMNPKISDFGMARIFTQESVSNTNRIVGTHGYMSPEYIMEGVFSTKSDVYSFGVLLLEIVGGRRSLGCYGVDRPLNMIGHTWELWKDGASSELVDPSIKESFDPNEVQRCIHIGLLCVQHYADDRPTMSDIVSMLTNKSEIVSLPERPAFYVGRKIIHHELSSKGFCADSTVEITTSTVEITTSTIDMTDS* 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1576 800 Gene3D - 27 157 IPR036426 -
Pvu11g1576 800 Gene3D Transferase(Phosphotransferase) domain 1 553 753 - -
Pvu11g1576 800 SMART blect_4 33 160 IPR001480 -
Pvu11g1576 800 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 12 782 - -
Pvu11g1576 800 Pfam PAN-like domain 331 362 IPR003609 -
Pvu11g1576 800 Pfam D-mannose binding lectin 82 184 IPR001480 -
Pvu11g1576 800 ProSiteProfiles Bulb-type lectin domain profile. 33 154 IPR001480 -
Pvu11g1576 800 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 12 782 - -
Pvu11g1576 800 SUPERFAMILY alpha-D-mannose-specific plant lectins 82 178 IPR036426 -
Pvu11g1576 800 SMART serkin_6 477 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1576 800 ProSiteProfiles Protein kinase domain profile. 477 759 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1576 800 Pfam Protein tyrosine and serine/threonine kinase 480 744 IPR001245 GO:0004672|GO:0006468
Pvu11g1576 800 PIRSF SRK 5 274 IPR024171 GO:0004674
Pvu11g1576 800 PIRSF SRK 276 796 IPR024171 GO:0004674
Pvu11g1576 800 SUPERFAMILY Protein kinase-like (PK-like) 462 761 IPR011009 -
Pvu11g1576 800 Gene3D Phosphorylase Kinase; domain 1 437 552 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1576 Pvu-Chr11 39824910 39827974 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1576 455 760 Receptor kinase-like Gene Family AT3G45860 56.731 1.68e-116 366
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1576 PK_Tyr_Ser-Thr 3.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1576 - - vun:114168194 1305.81