Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1575 ATGCCCAGTCTTACTATTCTCTTATTTTTGTTCTTCTCTAAATTTTCGGCCGCTTCAGATACCATCACCCAGTATGGGTCACTTGAAGAAGACAAGACCTTGGTTTCAAACAATGGAATCTTTGAGTTGGGTTTCTTCACCCCATCTACCACTTCCTCAAACCGCTATCTAGGAATCTGGTACACAAACATACCCCTCAGAACCGTTGTTTGGGTTGCAAACCGTGAAAGTCCAATCACCGACAACTCAACAAAGTTGAGCATAAACTCACAGGGAGACCTCGTACTCAGCCACAGCAACACCGTTATTTGGTCAACTAACACAACAACAACAACAGGGGTGCTTGTGGTGGCACAGATTTTGGACTCAGGCAACTTGGTTCTCAGAGACGACAAAGACACGAATCCTGAAAACTACTTCTGGCAGAGTTTTGACTATCCTTCAGACACGTTTCTTCCTGGCATGAAAATAGGGTGGGACTTGAAGAAAGGGCTTAACAGGGGCCTAACCGCGTGGAAAAACTGGGATGACCCTTCACCAGGGGACTTCACGGGATTCATTTCACAAACAAGTTATCCTGAAGAGGTTATGTGGAAGGGCTCTACAAAGTTCTACAGAAGTGGCCCTTGGGATGGAACTAAATTAAGCGGTAGCCCCACTTTGTCCAACTCGGTAGTAAGCTACACGATTGTCTCCAACAAGGATGAATTCTACGCTACATATAGCACGAATGATAGCTCAGTGATTTCAAGACTTGTGTTGAATCAAACGCTTTATCTTCGTCAGCGCTTGACATGGAACAATGATGGTAAAACGTGGAGGGTGTCTTCTCAGTTGCCAAGTGATTTATGCGACGGCTATAATATATGTGGCGCGTTTGGGATTTGTGACGTTAGTAAGGCACCCATGTGCAGGTGTTTAGATGGATTCAAGCCAAAAGCACCCCAAAACTGGACCCAGATGAACTTTCATGAAGGGTGCGTGCACAACCAAACTTGGAGCTGCATGGACAAGACTAAAGATGGGTTTCTCAGATTCGCTAACGTAAAGACACCAGAGACTACATTTTCATGGGTTAATGCAAGTATGACACTTGAGGAATGCAAGAACAAATGCAGGGAAAATTGCTCATGCAAAGCTTATGCAAATTCAGACATAACAGGAGAAGGTAGTGGGTGTGTCATTTGGTTAGGTGATCTGTTAGATATAAGAATCATGGCAAATGCTGGACAAGATCTGTATGTTAGATTGGCCGTGTCAGAAACAGAAAATCGACATGGGAATGATCATTCGAAGAGAAAGGTAGTTGTGTTTGCAAGCACCATTTGCTCAGCTATTGTGATACTATTGATTTCCATATTCATTTATTGGAGTAGCAAAAGAAAAACCAAAGTCAAAGGAATGGAAAATGAAAGCCAAGAAGAAGACTTTGAGCAACCTTTGTTTGACCTTGCCTCAGTAGAACACGCAACAAATTACTTCTCAAATCACAATAAGCTTGGTGAAGGTGGTTTTGGGCAAGTATATAGGGGAACACTACCCGATGGACGAGAGATTGCTGTTAAGAGACTTTCACAAACATCTACACAAGGATTAAAAGAATTTAAGAATGAGGTTATGTTATGTGCCCAACTTCAACATCGAAATCTAGTAAAAGTTCTTGGATGTTGCATTCAACATAACGAGAAACTGCTTTTGTACGAATATATGGCCAACAAAAGCTTAGACTTCTTTCTCTTTGATTCTAGTGGAAGAAAGTTGCTTGATTGGCCTAAGCGTCATCGCATCATAAATGGAATTGCTCGAGGATTACAATATCTTCATCAAGACTCCAGACTAAGAATCATACATAGAGATCTTAAGGCGAGTAACGTGTTATTAGATGATAAAATGAATCCAAAAATTTCAGATTTCGGTTTAGCTCGAATGTGTGGAGATGATCAGATTGAAGGACAAACAAACAAAGTAGTTGGTACATATGGTTATATGTCACCTGAATATGCTTTTGATGGAATATTTTCCACCAAATCCGATGTGTTTAGCTTCGGTGTATTATTGCTTGAGATAGTAAGTGGCAAGAAAAACAGGCTCTTTCATCCAAACGACTACAATAATCTTATTGATCATGCATGGGGATTGTGGAGAGAGGGAAATGCAATACAATTTATTGACTCTAGTTTGGAGGATTCAAGCATTCTAAACGAAGCCCTACGTTGTATTCATATTGGTCTTTTATGTGTACAACATCATCCTAATGAAAGACCAAACATGGATTTGGTGATCACAATGTTGAACAACGAGAACATATTACCTCTTCCCAAGGAGCCTAGCTACTTAATCAAAGACATCTTAACTAGTAGAAAATCTTCTTGTAAGAGCCTTGCATCCTTTTCTGTTAATAACGTCACTATCTCAATGTTAAGTGATAGATAG 2433 0.4061 MPSLTILLFLFFSKFSAASDTITQYGSLEEDKTLVSNNGIFELGFFTPSTTSSNRYLGIWYTNIPLRTVVWVANRESPITDNSTKLSINSQGDLVLSHSNTVIWSTNTTTTTGVLVVAQILDSGNLVLRDDKDTNPENYFWQSFDYPSDTFLPGMKIGWDLKKGLNRGLTAWKNWDDPSPGDFTGFISQTSYPEEVMWKGSTKFYRSGPWDGTKLSGSPTLSNSVVSYTIVSNKDEFYATYSTNDSSVISRLVLNQTLYLRQRLTWNNDGKTWRVSSQLPSDLCDGYNICGAFGICDVSKAPMCRCLDGFKPKAPQNWTQMNFHEGCVHNQTWSCMDKTKDGFLRFANVKTPETTFSWVNASMTLEECKNKCRENCSCKAYANSDITGEGSGCVIWLGDLLDIRIMANAGQDLYVRLAVSETENRHGNDHSKRKVVVFASTICSAIVILLISIFIYWSSKRKTKVKGMENESQEEDFEQPLFDLASVEHATNYFSNHNKLGEGGFGQVYRGTLPDGREIAVKRLSQTSTQGLKEFKNEVMLCAQLQHRNLVKVLGCCIQHNEKLLLYEYMANKSLDFFLFDSSGRKLLDWPKRHRIINGIARGLQYLHQDSRLRIIHRDLKASNVLLDDKMNPKISDFGLARMCGDDQIEGQTNKVVGTYGYMSPEYAFDGIFSTKSDVFSFGVLLLEIVSGKKNRLFHPNDYNNLIDHAWGLWREGNAIQFIDSSLEDSSILNEALRCIHIGLLCVQHHPNERPNMDLVITMLNNENILPLPKEPSYLIKDILTSRKSSCKSLASFSVNNVTISMLSDR* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1575 810 CDD STKc_IRAK 500 766 - -
Pvu11g1575 810 Pfam D-mannose binding lectin 68 173 IPR001480 -
Pvu11g1575 810 PIRSF SRK 1 810 IPR024171 GO:0004674
Pvu11g1575 810 Gene3D Phosphorylase Kinase; domain 1 456 569 - -
Pvu11g1575 810 ProSiteProfiles Bulb-type lectin domain profile. 19 141 IPR001480 -
Pvu11g1575 810 Gene3D - 13 144 IPR036426 -
Pvu11g1575 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 178 IPR036426 -
Pvu11g1575 810 CDD B_lectin 27 147 IPR001480 -
Pvu11g1575 810 ProSiteProfiles PAN/Apple domain profile. 335 418 IPR003609 -
Pvu11g1575 810 Gene3D Transferase(Phosphotransferase) domain 1 570 770 - -
Pvu11g1575 810 SUPERFAMILY Protein kinase-like (PK-like) 478 764 IPR011009 -
Pvu11g1575 810 SMART serkin_6 494 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1575 810 Pfam S-locus glycoprotein domain 205 313 IPR000858 GO:0048544
Pvu11g1575 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 615 627 IPR008271 GO:0004672|GO:0006468
Pvu11g1575 810 CDD PAN_AP_plant 337 418 - -
Pvu11g1575 810 SMART blect_4 25 147 IPR001480 -
Pvu11g1575 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 803 - -
Pvu11g1575 810 SMART ntp_6 338 417 IPR003609 -
Pvu11g1575 810 Pfam PAN-like domain 335 403 IPR003609 -
Pvu11g1575 810 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Pvu11g1575 810 Gene3D Hepatocyte Growth Factor 334 415 - -
Pvu11g1575 810 ProSiteProfiles Protein kinase domain profile. 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1575 810 Pfam Protein tyrosine and serine/threonine kinase 497 762 IPR001245 GO:0004672|GO:0006468
Pvu11g1575 810 PANTHER CYSTEINE-RICH RLK (RECEPTOR-LIKE KINASE) PROTEIN 27 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1575 Pvu-Chr11 39788702 39792190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1575 435 787 Receptor kinase-like Gene Family AT4G05200 50.418 1.31e-122 383
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1575 PK_Tyr_Ser-Thr 1.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1575 - - gmx:100786696 1248.8