Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1567 ATGTTTCCAAGAAAGATAGGAGGAATTGTAGTTGGCTGCACTATATTCATCATTGCCGTTGCAGTATTTGGAATCATATTTTGTATTAAGAGGAAGAATCTCAAGAATTCAGCAGAAACAAATAACTGGAAGGAGAAGAATGAGAAGGATGACATTGATTTACCCATATTCGACTTTTTATCCATCTCCAATGCCACAAATAACTTTTCTGAGAGTAACATATTGGGACAAGGGGGATTTGGACCAGTGTACAAGGGTATATTATCAGATGGGCAAGAAATTGCAGTTAAGAGGCTTTCCAAAACCTCGGGACAAGGTTTAGAAGAGTTCAAAAATGAAGTAATGTTGATTGCAAAACTTCAACACCGCAATCTTGTAAAGCTTCTTGGTTGTTCTATTCAGCAAGATGAAAAGATGCTAATTTATGAATTCATGCCAAATAGAAGCTTGGATTATTTTATTTTTGATTCAACAAGAAGTACATTAATTGGTTGGGCTACGAGATTTGAAATTATTGGTGGAATTGCTAAAGGACTTCTTTATCTTCATCAAGATTCTAGACTAAAAATCATTCATAGGGATCTAAAGACCAGTAACATTCTTCTTGACAGTAATATGAAACCAAAAATATCAGATTTTGGTATGGCTAGAACTTTTGGCCTGGATCAAGATGAAGCAAACACAAATAAAGTGATGGGAACATATGGCTATATGCCTCCTGAATATGCTGTGCATGGTTCATTTTCAGTCAAATCAGACGTATTCAGCTTTGGGGTGATTGTATTGGAGATAATCAGTGGGAGGAAGAATAGAGGATTTCGTGACCCAAACAATCAGCTAAATCTTCTTGGACATGCATGGAGACTATGGATTGAAAAAAGGCCAATGGAACTAATGGATGACTCAGTGGACACTGCAGTTGTTCCATCTGAAATATTAAGACATATTCATATTGGTTTGTTATGCGTACAACAAAGACCAGAGGATAGGCCAAACATGTCTTCAGTAGTTTTCATGTTGAACAGTGAAAATTTATTGCCTGAGCCAACTCAACCTGGATTTTACACAGGAAGAAATAATTCGACCACGACAGATTCTTCCTCAAGAAATTGTGATGCGTATTCCCTCAACGAAATGTCTGAGACATTGGTTGAGGCAAGATAG 1164 0.3686 MFPRKIGGIVVGCTIFIIAVAVFGIIFCIKRKNLKNSAETNNWKEKNEKDDIDLPIFDFLSISNATNNFSESNILGQGGFGPVYKGILSDGQEIAVKRLSKTSGQGLEEFKNEVMLIAKLQHRNLVKLLGCSIQQDEKMLIYEFMPNRSLDYFIFDSTRSTLIGWATRFEIIGGIAKGLLYLHQDSRLKIIHRDLKTSNILLDSNMKPKISDFGMARTFGLDQDEANTNKVMGTYGYMPPEYAVHGSFSVKSDVFSFGVIVLEIISGRKNRGFRDPNNQLNLLGHAWRLWIEKRPMELMDDSVDTAVVPSEILRHIHIGLLCVQQRPEDRPNMSSVVFMLNSENLLPEPTQPGFYTGRNNSTTTDSSSRNCDAYSLNEMSETLVEAR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1567 387 SUPERFAMILY Protein kinase-like (PK-like) 54 340 IPR011009 -
Pvu11g1567 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 190 202 IPR008271 GO:0004672|GO:0006468
Pvu11g1567 387 Gene3D Transferase(Phosphotransferase) domain 1 145 347 - -
Pvu11g1567 387 CDD STKc_IRAK 75 341 - -
Pvu11g1567 387 SMART serkin_6 69 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1567 387 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 364 - -
Pvu11g1567 387 MobiDBLite consensus disorder prediction 349 372 - -
Pvu11g1567 387 Pfam Protein tyrosine and serine/threonine kinase 72 337 IPR001245 GO:0004672|GO:0006468
Pvu11g1567 387 Gene3D Phosphorylase Kinase; domain 1 41 144 - -
Pvu11g1567 387 ProSiteProfiles Protein kinase domain profile. 69 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1567 387 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 6 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1567 Pvu-Chr11 39616915 39618990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1567 9 354 Receptor kinase-like Gene Family AT4G23230 54.155 3.04e-132 391
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1567 PK_Tyr_Ser-Thr 4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1567 - - gmx:100802416 661.759