Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1566 ATGATAGAAACCGTACCAAAATCAATGGAGAGCTTTGACATGCTTGGTGTGTGCGTTTTGTTCCTCTCTTTGATAACCATGTCCTCCACTTTGGAGATGATTACTCCGACCCAACCCCTCAGAGATCCTGTGAATGAGAATGTAACTCTTGTCTCAACAAACGGAACCTTCGAAGCAGGATTCTTCAGCCTTGAAAATTCCGGTAGCCGTTACCTAGGAATTTGGTACAGAAACATATCCCCCAGAACAGTTGTTTGGGTGGCCAACAAAGAAACACCACTTCAAGACCACTCTGGAGTCTTGGAAGTAGACGGTGATGAAGGGTTTCTCAGTATCAAAGATGGGACAGGAGCCAAAATTTGGTTCTCAAATGCATCATCACACACACCAAGAAAACCAGTTGCGGTGGAGTTGTTGGAATCAGGAAACATGGTTGTGAAAGATGGTGACAACAACTTTTTATGGCAAAGCTTTGATTACCCTGATGATACTTTTCTTCCGGGAATGAAACTTGGAATGAACTTCAAAACTGGTCATCATCGAGCTCTAAGATCATGGAAATCCTTCACAGATCCTACTCCAGGTGAATTTGCATTTGGTGTTGATACTCGTGGCCTTCCTCAGCTAGTCATCACAAAGGAGCCTAGTGATTACATAGTTTATAGACCAGGTTCTTGGAATGGTCTTAGTATCACAGGACTACCTGGAGAGATAACTGACCCATTAATCAAATCCCTTTTTGTTATGAATGAAGATGAAATCTTCTATCAGATTCAGCTCTTGAACAGTTCAACTAAGCTGAGAAGCAGATTGATCCCAGAAGGGTATCAAGTGCGTTTAATATGGTCAGATGAGACAAAAAGATGGGACACGAAATACCCTGGTTCATTTGATGAGTGTGAGAGATATGGCATGTGTGGTGCAAATACTATATGCAATGTGAGTGGAGCACATCAACACTGTGAATGCTTGAGTGGGTTTCAATCCAACTTTGCAGATTCAACTTGTGATCGAACTAGACCTCTGGGTTGTAACAAGGGAGATAAATTTCAGAAGTACGAGGGAATGAAATTGCCAGACACATCATCGTCTTGGTATGATAAGAGTATTAGTCTTGGGGAATGCGAGAAATTGTGCTTGAGCAACTGCTCTTGTACTGCATATGCTCAACTGAATATCAGTGTCCAGGGAAGTGGCTGCTTGCATTGGTTTCATGAGATTGTTGACATCAGGGTACTAGCGCAGGGTGGACAAGATTTTTATCTGCGAATTACAACTTCAAAACTTCAAGGGAACTTGTGA 1302 0.4224 MIETVPKSMESFDMLGVCVLFLSLITMSSTLEMITPTQPLRDPVNENVTLVSTNGTFEAGFFSLENSGSRYLGIWYRNISPRTVVWVANKETPLQDHSGVLEVDGDEGFLSIKDGTGAKIWFSNASSHTPRKPVAVELLESGNMVVKDGDNNFLWQSFDYPDDTFLPGMKLGMNFKTGHHRALRSWKSFTDPTPGEFAFGVDTRGLPQLVITKEPSDYIVYRPGSWNGLSITGLPGEITDPLIKSLFVMNEDEIFYQIQLLNSSTKLRSRLIPEGYQVRLIWSDETKRWDTKYPGSFDECERYGMCGANTICNVSGAHQHCECLSGFQSNFADSTCDRTRPLGCNKGDKFQKYEGMKLPDTSSSWYDKSISLGECEKLCLSNCSCTAYAQLNISVQGSGCLHWFHEIVDIRVLAQGGQDFYLRITTSKLQGNL* 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1566 433 ProSiteProfiles Bulb-type lectin domain profile. 35 159 IPR001480 -
Pvu11g1566 433 CDD PAN_AP_plant 341 424 - -
Pvu11g1566 433 SUPERFAMILY alpha-D-mannose-specific plant lectins 84 192 IPR036426 -
Pvu11g1566 433 CDD B_lectin 43 161 IPR001480 -
Pvu11g1566 433 PIRSF SLG 7 432 IPR035446 -
Pvu11g1566 433 Gene3D - 30 158 IPR036426 -
Pvu11g1566 433 Pfam PAN-like domain 344 410 IPR003609 -
Pvu11g1566 433 ProSiteProfiles EGF-like domain profile. 296 333 IPR000742 -
Pvu11g1566 433 ProSiteProfiles PAN/Apple domain profile. 344 425 IPR003609 -
Pvu11g1566 433 Gene3D Hepatocyte Growth Factor 342 422 - -
Pvu11g1566 433 PANTHER - 16 430 - -
Pvu11g1566 433 Pfam S-locus glycoprotein domain 221 330 IPR000858 GO:0048544
Pvu11g1566 433 PANTHER - 16 430 - -
Pvu11g1566 433 SMART blect_4 41 161 IPR001480 -
Pvu11g1566 433 SMART ntp_6 345 424 IPR003609 -
Pvu11g1566 433 Pfam D-mannose binding lectin 83 187 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1566 Pvu-Chr11 39603327 39606811 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1566 - - vun:114170595 739.569
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1566 11 39603327 39606811 Pvu11g1566 11 39603327 39606811 ECH
Pvu11g1566 11 39603327 39606811 Pvu5g0910 5 24200166 24203696 PCT