Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1561 ATGTTGGCAATGTCATGTTTTTGCTTCTTGGTATTCTTCTGCATGTGGGGGACAAGCACATCACTGGAGAGTTTAAGAGTGAGTCAAACCATCCGAGATGATAAGAATGAGACTTTGGTTTCAGCAGGTGGAATTATTGAACTGGGTTTCTTGGACCTGGGAAATTCATCCAGGAGATACTTAGCTATATGGTACAGAAATGTATCCCCTAGAACAGTTGTGTGGGTGGCTAACAGAAATACACCTCTTCATAATAGATCAGGAGTTCTCAAACTCAATGAGAAAGGGATTCTTGTGCTACTCAATGGCACACACAGCATTATTTGGTCCTCCAACATCTCAGGCAAAGCAGTGAATGATCCAATTGCTCAGCTCTTGGATTCGGGAAATTATGTAGTGAAAGTCAAGGAGAGTATCTTGTGGCAGAGTTTTGATGATACGAGTGATACAATTTTGCCTGGAATGAAGCTTGGATGGAACTTAGCAACTGGTAAAGAAAGATACATGTCATCATGGAAAAGTGTTGATAATCCTGCTGAGGGAGAATATAGTGTTAAACTTGACCGTAGAGGATATCCTCAAGCAATTTTGTTCAAGGGATCTGAGATGAAGTTCAGACTTGGGCCATGGAATGGCCAGTCATGGGCAGGGTATCCTGTTAGAAGTCCTCAAAGTTCACAAATATTTGTATTTAATAAAACAGAATTGTACTATGAGTTCAGGCTTCTGAATAGTTCAGACATCATCAGCATATTTCAACTAACCCCATCTGGTGTTGGTCAGAAAATATTTTGGAAAACTCACAACACCACCGAGAGAGTTCTCCTGCCTCAGGAGAGAGATCAATGCGAGAGATATGCTTTTTGTGGTGCAAATTCCATATGCAGTTATGATGGTAACCATCCAACTTGTGAATGCCTGAGAGGATATGTTCCCAAGTCTCCTCATCAGTGGAACATGGCAATTTGGGACAAGGGTTGTGTTCCAAGGAATAAGTCTAATTGCAAAAACAGTTATACGGATGACTTCTTACCCTACTCACACATGAAATTGCCAGACACATCTTCTTCGTGGTTTGATACAACTGTGAACCTTGATAAATGTCGCGAGTTATGTCTTAAAACTTGCTCTTGTATTGCATATGCAAATTTAGATATTCGTGAAGGAAGTGGCTGCCTACATTGGTTCAATACTCTAGTTGACTTGAGGAATTTCTCTCAATTGGGGCAAGACATTTACATCAGAGTCCCAGCTTCAGAATTAGATCATGGTGGCCATGGAAACATGAAGAATAAGATAGTAGGAATCACTCTTGGTGCGATTATTTTGGGTTTAATCATCACATGTGTCTGCATACTGATAATTAAAAATTCAGTGGCAGCAGGTGTATATTGTCATATGGTACAACTTCAATGGCGGAAAGAATACTTCAGATTGAGGAATGAAGACATGGATTTTCCAACATTTGAGTTGTCTATCATTGCGAAAGCCACTAATAATTTTTCCAGCAGCAATAAAATAGGGGAAGGTGGATTTGGACCAGTTTATAAGGGTACACTGCTAGATGGGAGAGAGGTGGCAGTAAAAAGGAACTCATTGATGTCTGATCAAGGACAGAACGAGTTGAAAAATGAAGTTGTTTTGATTGCAAAACTTCAACACCGTAATCTTGTTAAACTGTTAGGTTGCTGCATTCAAGGAGAGGAAAAGTTGTTGATCTATGAATACATGCCTAACAAGAGCTTAGACTACTTCATCTTTGATGAAACCAGAAGCAAGCTCTTATCCTGGCATCAACGCTTTCACATCATTTGTGGCATTGCTAGAGGAATTCTCTATCTTCACCAAGACTCTAGCTTAAGAATTATTCACAGAGATTTGAAAACCAGCAATATCCTATTAGATGCCTATATGAATCCTAAAATCTCAGACTTTGGCATGGCTCGGACTTTTGGCAGTGATCAAGTTGAAGACAAAACCAGAAAAGTGGTTGGAACGTATGGCTACATGCCTCCAGAGTATGCTGTTCATGGCCATTACTCTGTGAAATCAGATGTCTTTGGTTTTGGTGTGATAGTACTAGAGATAGTTAGTGGAAACAGGAACAGGGGATATTCTGACCCAGAACACTCTCTTAATCTTCTTGGGCATGCATGGAGACTATGGACTGAAGAAAGGCCATTGGAACTAATAGATAATCAAATACTTGAAAGATGCCTTCCTTTTGAAGCCTTAAGATGCATACACGTAGGTTTGTTATGTGTGCAACAAAAACCAGAAGATAGGCCAGACATGTCTGTTGTCATTCCTATGCTGAATGGCGAGAAGTTATTGCCTCGGCCAAAAGCTCCTGGATTTTACACAGGAGGCTGTATTCCTGAATCAGTATCATCATTGAAAACATGCAATCTTTTATCAAGAAATGAGATGTCCCTCACAATTTTTGAGGCAAGATAG 2457 0.4005 MLAMSCFCFLVFFCMWGTSTSLESLRVSQTIRDDKNETLVSAGGIIELGFLDLGNSSRRYLAIWYRNVSPRTVVWVANRNTPLHNRSGVLKLNEKGILVLLNGTHSIIWSSNISGKAVNDPIAQLLDSGNYVVKVKESILWQSFDDTSDTILPGMKLGWNLATGKERYMSSWKSVDNPAEGEYSVKLDRRGYPQAILFKGSEMKFRLGPWNGQSWAGYPVRSPQSSQIFVFNKTELYYEFRLLNSSDIISIFQLTPSGVGQKIFWKTHNTTERVLLPQERDQCERYAFCGANSICSYDGNHPTCECLRGYVPKSPHQWNMAIWDKGCVPRNKSNCKNSYTDDFLPYSHMKLPDTSSSWFDTTVNLDKCRELCLKTCSCIAYANLDIREGSGCLHWFNTLVDLRNFSQLGQDIYIRVPASELDHGGHGNMKNKIVGITLGAIILGLIITCVCILIIKNSVAAGVYCHMVQLQWRKEYFRLRNEDMDFPTFELSIIAKATNNFSSSNKIGEGGFGPVYKGTLLDGREVAVKRNSLMSDQGQNELKNEVVLIAKLQHRNLVKLLGCCIQGEEKLLIYEYMPNKSLDYFIFDETRSKLLSWHQRFHIICGIARGILYLHQDSSLRIIHRDLKTSNILLDAYMNPKISDFGMARTFGSDQVEDKTRKVVGTYGYMPPEYAVHGHYSVKSDVFGFGVIVLEIVSGNRNRGYSDPEHSLNLLGHAWRLWTEERPLELIDNQILERCLPFEALRCIHVGLLCVQQKPEDRPDMSVVIPMLNGEKLLPRPKAPGFYTGGCIPESVSSLKTCNLLSRNEMSLTIFEAR* 819
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1561 818 SMART serkin_6 501 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1561 818 CDD PAN_AP_plant 332 417 - -
Pvu11g1561 818 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 816 - -
Pvu11g1561 818 SMART ntp_6 338 416 IPR003609 -
Pvu11g1561 818 Gene3D - 20 145 IPR036426 -
Pvu11g1561 818 ProSiteProfiles EGF-like domain profile. 279 316 IPR000742 -
Pvu11g1561 818 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1561 818 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 177 IPR036426 -
Pvu11g1561 818 SUPERFAMILY Protein kinase-like (PK-like) 483 772 IPR011009 -
Pvu11g1561 818 ProSiteProfiles PAN/Apple domain profile. 335 417 IPR003609 -
Pvu11g1561 818 Pfam S-locus glycoprotein domain 205 314 IPR000858 GO:0048544
Pvu11g1561 818 SMART blect_4 28 147 IPR001480 -
Pvu11g1561 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 622 634 IPR008271 GO:0004672|GO:0006468
Pvu11g1561 818 PIRSF SRK 1 818 IPR024171 GO:0004674
Pvu11g1561 818 ProSiteProfiles Zinc finger SWIM-type profile. 361 403 IPR007527 GO:0008270
Pvu11g1561 818 CDD STKc_IRAK 507 774 - -
Pvu11g1561 818 Gene3D Transferase(Phosphotransferase) domain 1 577 778 - -
Pvu11g1561 818 Pfam D-mannose binding lectin 72 173 IPR001480 -
Pvu11g1561 818 CDD B_lectin 36 145 IPR001480 -
Pvu11g1561 818 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672|GO:0006468
Pvu11g1561 818 ProSiteProfiles Bulb-type lectin domain profile. 24 146 IPR001480 -
Pvu11g1561 818 PANTHER S-LOCUS LECTIN KINASE FAMILY PROTEIN 14 816 - -
Pvu11g1561 818 Pfam PAN-like domain 335 402 IPR003609 -
Pvu11g1561 818 Gene3D Phosphorylase Kinase; domain 1 464 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1561 Pvu-Chr11 39484380 39487942 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1561 494 787 Receptor kinase-like Gene Family AT4G23140 60.465 2.51e-123 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1561 PK_Tyr_Ser-Thr 1.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1561 - - gmx:100786000 1219.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1561 11 39484380 39487942 Pvu5g0912 5 24303686 24307623 PCT