Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1559 ATGTTATTTATTTGGTTCTTATTATTATCCCACTTGTCTAGAATTGGCAATTCATTAGATAGTTTAGCAGTGAGTGAATCCATCCAAGATGGTAAGACTTTGGTTTCTGCAGGTGGAATCACTGAAGCTGGTTTCTTTAGCCCAGGAAATTCAACTAGACGATACTTGGGCATATGGTACGCAAATGTATCCCCTTTCACAGTGGTGTGGGTGGCCAACCGAAACACTCCTCTTGAGAATAAATCAGGAGTTCTCAAGCTCAATGAAAAAGGGATTCTTGTTCTTCTAGATGCTGCAAACAACACCATTTGGTCATCATCCAACATCTCAAGCAAAGCAGGGAATGATCCAATTGCTCAGCTCTTGGATTCTGGAAATTTTGTAGTTAAAAAGGGACAAGAAACCAATGGCGTCTTGTGGCAGAGTTTTGATTATCCAGGTGATACATTTATGCCAGGAATGAAACTTGGATGGGACTTGGAGACTGGTGTAGAAAGGTTTGTATCATCTTGGAAAAGTGTTGATGATCCTGCTGAGGGAGAATATGCTCTAAAAATGAATCTTAGCGGATATCCTCAAATGATGATATTCAAGGGACCTGATAAAGAGTTTAGAGTTGGGTCGTGGAATGGATTGTCTCTAGTGGGAAATCCAGGTCCAACCTACGGCACGGCACCAAGATTCGTGCTCAATGAAAAAGAGGTGTATTACGAGTACGGGGTTGAGGATAGTTCGTGGTTTATCGTATATAAAGTGACCCCTTCAGGAGGACAAATTTTGTATTGGACAACTCAGACAAGAAATCAACAAGTTGTCTCAAATGGGGAGCAAGATCGATGCGAGAATTATGCCTTTTGTGGTGCAAATTCTATATGCAATTATGATGGTAGCCATCCAAGTTGTGAATGCCTTAGAAGTTATGTTCCCAAGTCTTCTGATCAGTGGAATATATCAATTTGGCTCAATGGTTGTGTTCCAAGGAATAAATCTAATTGCACAAATAGTTACACAGATGGCTTCTTGAAGTACACACACATGAAATTGCCAGACACTTCTTCATCACGGTTTGATGCGACTATGAGCCTTGATGAATGTCAGCAGTCATGCCTTATGAACTGTTCTTGTACAGGTTATGCAAGTTTAAATGTTCTTGATGGAGGTAGTGGCTGTCTACTTTGGTTTAATGATCTAGTTGACATGAGGAATTTCTCAGAGTGGGGACAAGACTTGTATATCAGAGTCCCTGCTTCAGAATTAGATCGTGGAAAGGACAAGAAAAGCATTGTAAGAATCATTGTTGGTGTGACTATTTTTGGATTAATCATATGTGTATGCATACTGGGAATTAAAAAGTCAGGGGCTGCAAGAAAATTTTGCAACAAGCATTACAAAAATATGCAGAGGAGGGTAGACACAGATTTGCCAACTTTCGATTTCTCAGTCTTAGCCAGTGCCACTGGAAACTTTTCAATTGAAAACAAGCTTGGGGAAGGGGGCTTTGGACCAGTATACAAGGGAACATTGATAGATGGGAAAGAGTTAGCTGTGAAAAGGCTTTCTCAGAAATCTTGGCAAGGGTTGGACGAGTTCAAAAATGAAGTTGCATTGATGACCAAACTTCAGCATCGTAATCTGGTAAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAAAATGCTGATTTATGAGTACATGCCGAACCATAGCTTGGACTACGTTGTTTTTGATCAAAGTAAAAGGAAGTTGCTAGATTGGCGTAAGCGTTTCAACATTATTACTGATGCAAATTTGGATCCCAAAATATCAGACTTTGGCTTGGCTCGATTGTTTTTGGGAGATCAAGTAGAGGCAAAAACGAATAGGGTGGCTGAAACATATGGCTACATGCCTCCTGAATATGCTGTGCATGGACATTTCTCAGTGAAATCAGATGTGTTTAGTTATGGTGTCATTGTACTAGAACTTCTAAGTGGGATGAAAATCCGAGAATTTTCGGACCCAGAACACTGCAACAATCTTCTTGGACATGCATGGAAATTATGGAGTGAAGACAGGGTACTGGAGCTACTAGATGAAGTGTTAGAAGAACAATGTGCGCTGTTTGAAGTTATACGATGTATACAAGTAGGTCTATTATGTGTGCAACAAAAACCAGATCATAGGCCAGACATGTCATCGGTGGTTTTAATGCTAAATGGCGATAAATTATTGCCAAAGCCAAATGTTCCTGGTTTTTACATTGAAATTGATGTTACTTGTAAAGCAAACTCTTCATCAGCAAATCACAAACCACTCTCAGATAATGAACTTTCCATCACAATTTTAGACGCAAGATAG 2337 0.3979 MLFIWFLLLSHLSRIGNSLDSLAVSESIQDGKTLVSAGGITEAGFFSPGNSTRRYLGIWYANVSPFTVVWVANRNTPLENKSGVLKLNEKGILVLLDAANNTIWSSSNISSKAGNDPIAQLLDSGNFVVKKGQETNGVLWQSFDYPGDTFMPGMKLGWDLETGVERFVSSWKSVDDPAEGEYALKMNLSGYPQMMIFKGPDKEFRVGSWNGLSLVGNPGPTYGTAPRFVLNEKEVYYEYGVEDSSWFIVYKVTPSGGQILYWTTQTRNQQVVSNGEQDRCENYAFCGANSICNYDGSHPSCECLRSYVPKSSDQWNISIWLNGCVPRNKSNCTNSYTDGFLKYTHMKLPDTSSSRFDATMSLDECQQSCLMNCSCTGYASLNVLDGGSGCLLWFNDLVDMRNFSEWGQDLYIRVPASELDRGKDKKSIVRIIVGVTIFGLIICVCILGIKKSGAARKFCNKHYKNMQRRVDTDLPTFDFSVLASATGNFSIENKLGEGGFGPVYKGTLIDGKELAVKRLSQKSWQGLDEFKNEVALMTKLQHRNLVKLLGCCIEGEEKMLIYEYMPNHSLDYVVFDQSKRKLLDWRKRFNIITDANLDPKISDFGLARLFLGDQVEAKTNRVAETYGYMPPEYAVHGHFSVKSDVFSYGVIVLELLSGMKIREFSDPEHCNNLLGHAWKLWSEDRVLELLDEVLEEQCALFEVIRCIQVGLLCVQQKPDHRPDMSSVVLMLNGDKLLPKPNVPGFYIEIDVTCKANSSSANHKPLSDNELSITILDAR* 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1559 778 SMART ntp_6 335 414 IPR003609 -
Pvu11g1559 778 ProSiteProfiles Protein kinase domain profile. 489 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1559 778 Pfam Protein tyrosine and serine/threonine kinase 490 581 IPR001245 GO:0004672|GO:0006468
Pvu11g1559 778 Pfam Protein tyrosine and serine/threonine kinase 590 729 IPR001245 GO:0004672|GO:0006468
Pvu11g1559 778 SMART blect_4 25 146 IPR001480 -
Pvu11g1559 778 ProSiteProfiles PAN/Apple domain profile. 332 415 IPR003609 -
Pvu11g1559 778 CDD B_lectin 25 146 IPR001480 -
Pvu11g1559 778 Gene3D Hepatocyte Growth Factor 331 411 - -
Pvu11g1559 778 CDD PAN_AP_plant 329 415 - -
Pvu11g1559 778 Gene3D - 14 143 IPR036426 -
Pvu11g1559 778 ProSiteProfiles Bulb-type lectin domain profile. 19 142 IPR001480 -
Pvu11g1559 778 SUPERFAMILY alpha-D-mannose-specific plant lectins 68 177 IPR036426 -
Pvu11g1559 778 PIRSF SRK 590 778 IPR024171 GO:0004674
Pvu11g1559 778 PIRSF SRK 1 595 IPR024171 GO:0004674
Pvu11g1559 778 Gene3D Phosphorylase Kinase; domain 1 462 564 - -
Pvu11g1559 778 SUPERFAMILY Protein kinase-like (PK-like) 473 742 IPR011009 -
Pvu11g1559 778 Gene3D Transferase(Phosphotransferase) domain 1 565 737 - -
Pvu11g1559 778 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 14 593 - -
Pvu11g1559 778 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 590 775 - -
Pvu11g1559 778 Pfam S-locus glycoprotein domain 204 311 IPR000858 GO:0048544
Pvu11g1559 778 Pfam D-mannose binding lectin 67 172 IPR001480 -
Pvu11g1559 778 Pfam PAN-like domain 332 400 IPR003609 -
Pvu11g1559 778 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 590 775 - -
Pvu11g1559 778 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 14 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1559 Pvu-Chr11 39468875 39472334 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1559 420 778 Receptor kinase-like Gene Family AT4G05200 43.176 7.26e-97 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1559 PK_Tyr_Ser-Thr 1.1e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1559 - - gmx:100815430 1191.41