Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1558 ATGACTACAACTTCCACTGCTGCTTTAGACAGTTTAGCAGTGAGCCAATCCATTCAAGATGGTAAAAATGAGACTTTGGTTTCAGCAGGTGGGATTACTGAACTGGGTTTCTTCAGCCCTGGGAATTCAGCAAGGAGATATTTGGGAATATGGTTCAGAAATGTATCCCCTTTGACAATAGTGTGGGTGGCTAACCGAAATACCCCTCTTGAGAATAACTCAGGAGTTTTCAAACTCAACGAAGAAGGGATTCTTCAGCTTCTCAATGCAACAAACAGCAGCATTTGGTCTACATCATCCAACGTATCAAGCAAAGCAGGGAATAATCCAATTGCTCGACTAATGGACTCGGGAAATTTGGTAGTGAGAAATGCACAAGAAACCAACGAGGAGGATGTGTTGTGGCAGAGTTTTGACCATCCATGTGACACATATTTGCCAGGAATGAAGCTTGGATGGAACTTGGAAACTAGTCTAGAAACTTTTATATCATCTTCGGTTAGTGATACCGATCCTGCTGTGGGAGAATATACAATAGAAGTTTCTCTTAGAGGGTATCCTCAAGTAATGAACTTCAAGGAAGGTGTTTTAGTAGCCAGAGCAGGTTCATGGAATGGCTTGTCACTGGTTGGAAATCCAGGTCCAACTCTTGAAACGTCACCAAAACTTGTGATTAGCGAAAAAGAAGTGTATTATGAGTATGAGCTTCTTGATCAATCTGCATTTTTTGTGTATATACTAACCCCTTCAGGCACAGGAAAGAGTTTGTATTGGACAACAGAAACAAGAACAGCACATGTGGTCTCAACTGGGGAGCAAGATCAGTGCGAGGATTATGCCTTTTGTGGTAACAATTCTATATGCAGCTATGATGGTAACCATCCAAGTTGTGAATGCCTCAGAGGGTACGTTCCCAAGTCTCCTGAGCAGTGGAATATATCAGTCTGGCGCAACGGTTGTGTTCCAAAGAACAAATCTACTTGTGAAAATAGTCATACAGATGGCTTCATCAAGTACACATACATGAAATTGCCAGACACTTCTTCATCATCGTTTAATACAACGATGAACCTTAATGAATGTCATAATTCATGTCTTGGAAACTGTTCTTGTACAGCATATGCAAATTTAGATGTTCGTGGTGGAGGAAGTGGATGTCTACTTTGGCTTGATAATCTAGTTGACATGAGGAGTTTCTCTCAATGGGGACAAGACTTCTATGTCAGAGTCCCTGCTTCAGAATTAGGTGCTGCAAGAAGAATTTTCAACAGGCATTACAGAAATATAGTACCCAGGAAGGAAGAGATTGATTTACCAACTTTCGATATGTCAGTCTTAGTTAATGCCACTGAAAATTTTTCAACAAGAAACAAGCTTGGGGAAGGTGGATTTGGACCAGTATACAAGGGCACACTAATAGATGGGAAAGAGATTGCAGTGAAGAGGCTTTCAAATAAATCTGAACAAGGGTTGGACGAGTTCAAAAATGAAGTGGCATTGATTTCCAAACTTCAGCACCGTAATCTTGTAAAGCTTTTTGGTTGCTGCATTGAAGGAGAAGAAAATATGTTGATTTATGAGTATATGTCAAACAAGAGCTTGGACTACTTTGTTTTTGATGAAACCAAAAGAAAGCTCCTAGATTGGCATAAGCGTTTTAACATTATTAATGGCATTGCTCGAGGACTTCTTTATCTTCATCAAGATTCCAGGTTGAGGATTATTCACAGAGATCTAAAAACTAGCAATATTTTGTTAGATGAAAATTTGCATCCCAAAATATCAGACTTCGGCTTGGCTCGATCACTTTTGGGAGATCAAGTTGAGGCAAACACAAACAGAGTGGCTGGAACATATGGTTACATACCTCCTGAGTATGCTGCACGTGGGCATTTCTCAGTGAAATCAGATGTGTTTAGTTATGGTGTAATAGTTCTAGAGATTATAAGTGGGAAGAGAAACTCAGAATTTTTGGACCCATGGCAAGACAATAATCTTCTAGGATATGCATGGAGATTGTGGACTGAAGACAGAGCCCTGAAATTATTGGATGAAGTGTTAGAAGAACTATATTGTGTGCCCTTTCAAGTCATACGATGCATAGAGGTTGGGCTATTATGTGTGCAACAAAGACCAGAAGATAGACCAGATATGTCATCAGTGGTTTTAATGTTAAATGGTGAGAAATTATTGCGAAAGCAAAAGGCTCCAGGATTTTATACTGAAGTAGATGTTACATCTCATGCGAATTCTTCATCAGCAATTCTCAAACCCAACTCTCATAATCAACTTTCCATCACAATGTTAGATGCGAGATAG 2319 0.3972 MTTTSTAALDSLAVSQSIQDGKNETLVSAGGITELGFFSPGNSARRYLGIWFRNVSPLTIVWVANRNTPLENNSGVFKLNEEGILQLLNATNSSIWSTSSNVSSKAGNNPIARLMDSGNLVVRNAQETNEEDVLWQSFDHPCDTYLPGMKLGWNLETSLETFISSSVSDTDPAVGEYTIEVSLRGYPQVMNFKEGVLVARAGSWNGLSLVGNPGPTLETSPKLVISEKEVYYEYELLDQSAFFVYILTPSGTGKSLYWTTETRTAHVVSTGEQDQCEDYAFCGNNSICSYDGNHPSCECLRGYVPKSPEQWNISVWRNGCVPKNKSTCENSHTDGFIKYTYMKLPDTSSSSFNTTMNLNECHNSCLGNCSCTAYANLDVRGGGSGCLLWLDNLVDMRSFSQWGQDFYVRVPASELGAARRIFNRHYRNIVPRKEEIDLPTFDMSVLVNATENFSTRNKLGEGGFGPVYKGTLIDGKEIAVKRLSNKSEQGLDEFKNEVALISKLQHRNLVKLFGCCIEGEENMLIYEYMSNKSLDYFVFDETKRKLLDWHKRFNIINGIARGLLYLHQDSRLRIIHRDLKTSNILLDENLHPKISDFGLARSLLGDQVEANTNRVAGTYGYIPPEYAARGHFSVKSDVFSYGVIVLEIISGKRNSEFLDPWQDNNLLGYAWRLWTEDRALKLLDEVLEELYCVPFQVIRCIEVGLLCVQQRPEDRPDMSSVVLMLNGEKLLRKQKAPGFYTEVDVTSHANSSSAILKPNSHNQLSITMLDAR* 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1558 772 ProSiteProfiles EGF-like domain profile. 272 309 IPR000742 -
Pvu11g1558 772 Gene3D - 4 138 IPR036426 -
Pvu11g1558 772 CDD STKc_IRAK 459 727 - -
Pvu11g1558 772 SMART ntp_6 331 410 IPR003609 -
Pvu11g1558 772 ProSiteProfiles Bulb-type lectin domain profile. 11 135 IPR001480 -
Pvu11g1558 772 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 415 770 - -
Pvu11g1558 772 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 414 - -
Pvu11g1558 772 SUPERFAMILY alpha-D-mannose-specific plant lectins 60 166 IPR036426 -
Pvu11g1558 772 Gene3D Transferase(Phosphotransferase) domain 1 529 743 - -
Pvu11g1558 772 CDD B_lectin 21 141 IPR001480 -
Pvu11g1558 772 Gene3D Phosphorylase Kinase; domain 1 428 528 - -
Pvu11g1558 772 ProSiteProfiles Protein kinase domain profile. 453 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1558 772 SUPERFAMILY Protein kinase-like (PK-like) 430 725 IPR011009 -
Pvu11g1558 772 ProSitePatterns Serine/Threonine protein kinases active-site signature. 574 586 IPR008271 GO:0004672|GO:0006468
Pvu11g1558 772 Pfam S-locus glycoprotein domain 200 307 IPR000858 GO:0048544
Pvu11g1558 772 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 6 414 - -
Pvu11g1558 772 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 415 770 - -
Pvu11g1558 772 SMART blect_4 17 141 IPR001480 -
Pvu11g1558 772 Pfam D-mannose binding lectin 59 165 IPR001480 -
Pvu11g1558 772 Pfam Protein tyrosine and serine/threonine kinase 455 723 IPR001245 GO:0004672|GO:0006468
Pvu11g1558 772 Gene3D Hepatocyte Growth Factor 327 407 - -
Pvu11g1558 772 ProSiteProfiles PAN/Apple domain profile. 328 411 IPR003609 -
Pvu11g1558 772 SMART serkin_6 453 725 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1558 772 Pfam PAN-like domain 328 396 IPR003609 -
Pvu11g1558 772 CDD PAN_AP_plant 325 411 - -
Pvu11g1558 772 PIRSF SRK 421 772 IPR024171 GO:0004674
Pvu11g1558 772 PIRSF SRK 1 434 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1558 Pvu-Chr11 39455311 39458490 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1558 441 772 Receptor kinase-like Gene Family AT4G11530 53.687 5.39e-115 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1558 PK_Tyr_Ser-Thr 6.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1558 - - gmx:100815430 1218.37