Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1551 ATGACATTAACTTCTTCTACTCTCGCATCCTTGACATCATTCCTTTGCCTGTTTATGTTTTGTGTTAATGCAGTCACCAACAAAGAATTTTTGCAAATAGGACAATCATTGGGAATCTTAGACTCCGTTGCTTCTCATAGCGGGAAGTTCGAATTGTGCTTTTTCACCAAAGTCAGAGACAACTCCACCAAGTACTACGTTGGTATACGGTATAAAAGAGTTCCAAACGACAAGAACAAGATTGTGTGGGTTGCTAACCGAGACTACGCGCTTGAAACATCCTCGGCAGTTCTCACCATTCAACCTGATGGAAATTTTGTGATCATGGATGGACAAGTTACATACCGTGTCAACAAGGTTTCAAACAATTTTAGTACCTATGCCATGCTCTTGGATTCAGGAAACTTGGTACTGCTGAAAACCTCAAATAAAGAGATTTTGTGGCAGAGTTTTGATTATCCTACGGACACCCTTTTACCCGGAATGAAATTAGGACAAGATGAAGGTTACAACACTACTTGGTCATTGCGATCATGGATAAGTGCAGATGACCCTGCCCCAGGAGCTTTTACCCTCCAGTATGATTCGGGCATGATCAGTCTAATCATCGACAATGGTTCTAATGTGTTCTGGATTGACGACAGTTACAATTATACTATTGGCAATGTTATTAGACGAACTGGTGTGGAAGAGCACGACCGCTATTTCACTTTTCCAGTTGGTAATGACTCTAGGTTGGTACTAGAAGTGTCTGGGGAGCTCAACCAGGAGTATTGGTTAGATGAAGCACAATTTTGGGTTTCTATTCAGTCATCCAAGTGTGGAACTAAGAATTCGTGTGGAGCTTTTTCCATCTGTAACCCGAAAGCTCGTGACCCTTGTGACTGTACTGATGGTTTCAGGCCGTTTGATGCTGATTACAAAGGGAACAAATCCGCTGGCTGTGTCCGGAAAAAAGAGTTATCGTCCTGCAGTAACGGTGTTGAATCCAACGATAAATTCAAGCAACTCTATCAAGTGAAATGGCCACCTACTCCGGACAGTTACAAGACCCTAAAGATCGACACAGCAAGAGGGTGTGAACGTACTTGTTCTACAAATTGTTCTTGTGTTGCTTTTGCTTACTATTTGAACGGTAACTGCCAGTTGTGGCTTGGTTCGGTACTGAATCTAAAGAACGTCTCAACAGATGTGGACAATTCAGATGATAGCAATCCAATTTTTTACCTAAGACTTGCTGCCTCAGAATTCGTTACTTCTGATTCAAACGCAACAAGAGATAAAGGACCAGAAAGTAATGTTAGGAAGAATCTACTTGTGATTGTTATACTGATCTCCCTTCTAACTTCTCTTATATTGGGCTTATTATTAGTTCACTGGATTAGAAGGAAGAGGAGAAAAGAGCAAATAATCTATACTCAATATAAACAGCTTTTACGATTTCGTCCAATCGAAATTGATTATATAGGTCATAAAGGTATATTATTCAATGGGGATGAGGTTGCTGTGAAAAGACTGTCACGGAGATCTGGTCAAGGATGGGAAGAGTTGAGAAATGAAGCCTTGTTAATTGCAAAACTCCAACACAACAATCTTGTTAGACTTCTTGGTTGCTGCATTGAACGAAATGAAAAGATGCTGATTTATGAATTTATGCCTAATAAAAGCTTGGATCTTTTCCTTTTTACTGATGAAAAAAAACGGATGCTAGATTGGCTAACAAGAGTCAGAATAATTGATGGGATTGCCCAAGGAATTCTTTATCTTCATCAGTATTCCAGGTTCAGGATCATTCACCGAGATTTAAAAGCCAGCAACATATTGTTGGACACCAATATGAATCCCAAAATATCAGATTTTGGAATGGCAAAAATATTTGGTGAAAATGAACTTCAAGAAAATACAAACAGAATTGTTGGAACATATGGTTACATGGCCCCTGAATATGCTATGGAAGGACTTTTCTCAATAAAATCGGACGTGTTTAGTTTTGGGGTACTTTTGTTGGAGATCATAAGTGGCAAGAAGAATACTGGCTTTTATCAAACCGGTTCCTTTAATCTTCTTGGATATGCTTGGGATCTTTGGACAAGCAATTCAGGAATGGACCTAATGGATACTGCACTAGACGATAGTGATACTAGTAGTAATTGTATGCATACTGTGCCAAGATATGTGAACATGGGACTTCTTTGCGTTCAAGAAAGTCCAGAAGATAGGCCAACCATGTCTGATGTTGTAGCAATGATTGGGAATGACACTGTACCCCTTCCTTCTCCTAAACCACCAGCATTTCTAAAGTTGAGAGGTGATGACAGTTCAACACTGCCCTGCAGAATGACAGAAAGTTTATCAGTGAATGGTATGACAGATACAATTGTGCAAGCAAGATGA 2394 0.3977 MTLTSSTLASLTSFLCLFMFCVNAVTNKEFLQIGQSLGILDSVASHSGKFELCFFTKVRDNSTKYYVGIRYKRVPNDKNKIVWVANRDYALETSSAVLTIQPDGNFVIMDGQVTYRVNKVSNNFSTYAMLLDSGNLVLLKTSNKEILWQSFDYPTDTLLPGMKLGQDEGYNTTWSLRSWISADDPAPGAFTLQYDSGMISLIIDNGSNVFWIDDSYNYTIGNVIRRTGVEEHDRYFTFPVGNDSRLVLEVSGELNQEYWLDEAQFWVSIQSSKCGTKNSCGAFSICNPKARDPCDCTDGFRPFDADYKGNKSAGCVRKKELSSCSNGVESNDKFKQLYQVKWPPTPDSYKTLKIDTARGCERTCSTNCSCVAFAYYLNGNCQLWLGSVLNLKNVSTDVDNSDDSNPIFYLRLAASEFVTSDSNATRDKGPESNVRKNLLVIVILISLLTSLILGLLLVHWIRRKRRKEQIIYTQYKQLLRFRPIEIDYIGHKGILFNGDEVAVKRLSRRSGQGWEELRNEALLIAKLQHNNLVRLLGCCIERNEKMLIYEFMPNKSLDLFLFTDEKKRMLDWLTRVRIIDGIAQGILYLHQYSRFRIIHRDLKASNILLDTNMNPKISDFGMAKIFGENELQENTNRIVGTYGYMAPEYAMEGLFSIKSDVFSFGVLLLEIISGKKNTGFYQTGSFNLLGYAWDLWTSNSGMDLMDTALDDSDTSSNCMHTVPRYVNMGLLCVQESPEDRPTMSDVVAMIGNDTVPLPSPKPPAFLKLRGDDSSTLPCRMTESLSVNGMTDTIVQAR* 798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1551 797 SMART serkin_6 483 726 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1551 797 Pfam Protein tyrosine and serine/threonine kinase 499 748 IPR001245 GO:0004672|GO:0006468
Pvu11g1551 797 SUPERFAMILY Protein kinase-like (PK-like) 491 749 IPR011009 -
Pvu11g1551 797 CDD B_lectin 29 154 IPR001480 -
Pvu11g1551 797 PIRSF SRK 1 483 IPR024171 GO:0004674
Pvu11g1551 797 PIRSF SRK 490 797 IPR024171 GO:0004674
Pvu11g1551 797 SMART blect_4 28 154 IPR001480 -
Pvu11g1551 797 Gene3D Transferase(Phosphotransferase) domain 1 552 755 - -
Pvu11g1551 797 Pfam D-mannose binding lectin 81 179 IPR001480 -
Pvu11g1551 797 ProSiteProfiles PAN/Apple domain profile. 324 413 IPR003609 -
Pvu11g1551 797 ProSiteProfiles Protein kinase domain profile. 464 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1551 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 81 184 IPR036426 -
Pvu11g1551 797 SMART ntp_6 329 404 IPR003609 -
Pvu11g1551 797 ProSiteProfiles Bulb-type lectin domain profile. 28 151 IPR001480 -
Pvu11g1551 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 25 451 - -
Pvu11g1551 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 492 794 - -
Pvu11g1551 797 Gene3D Phosphorylase Kinase; domain 1 485 551 - -
Pvu11g1551 797 Pfam S-locus glycoprotein domain 230 302 IPR000858 GO:0048544
Pvu11g1551 797 CDD PAN_AP_plant 322 413 - -
Pvu11g1551 797 Gene3D - 23 151 IPR036426 -
Pvu11g1551 797 Pfam Domain of unknown function (DUF3403) 752 797 IPR021820 GO:0004674
Pvu11g1551 797 Pfam PAN-like domain 328 390 IPR003609 -
Pvu11g1551 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 597 609 IPR008271 GO:0004672|GO:0006468
Pvu11g1551 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 492 794 - -
Pvu11g1551 797 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 ISOFORM X1 25 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1551 Pvu-Chr11 39170643 39174001 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1551 439 766 Receptor kinase-like Gene Family AT4G23190 51.282 2.76e-109 344
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1551 PK_Tyr_Ser-Thr 4.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1551 - - pvu:PHAVU_011G149500g 1582.39