Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1536 ATGGACAGCACCGAAGACTCATCCACCAGTTCACAACACCAACCGAACCTCCCACCCGGGTTTCGGTTCCACCCCACAGACGAAGAGCTCGTGGTTCACTACCTCAAGAAGAAAGTTGATTCTGTTCCTCTCCCTGTTTCAATCATCGCTGATGTTGATCTCTACAAGTTTGATCCATGGGAATTACCAGCTAAGGCATCGTTTGGGGAGGAAGAGTGGTACTTCTTCAGTCCAAGAGATAGGAAGTACCCAAATGGCGCGAGGCCAAACAGGGCTGCAACTTCAGGGTACTGGAAGGCCACTGGGACAGATAAGCCCATATGCAGTGGAATTCAAAAGGTTGGGGTGAAGAAATCTTTGGTTTTCTATGGAGGGAAGCCACCAAAAGGGGTAAAAACCGATTGGATCATGCATGAGTATCGTCTCGCTGAAACCAAGCCTAACAACAGGCCTCCTGGGTGTGACTTGGGCCACAAGAAAAACTCCCTAAGGCTGGATGATTGGGTGTTGTGCCGGATCTACAAGAAGGGCAACACACAAAGGTCACCTATGGACCATGAGAGGGATGATTCCATGGATGACATGATTGGAGAAGTACCTCCTTCCATCAACGTGGGCCACATGAATGCGAGATTTCACCTTTCAAAGATGTCTACGAACTACAGTGGTGCATTGTTGGAAAATGACAGAAACACGTTAGAAGGGGTGGTTATAGGCAATGGTGTGAATGGGATCAGCACTACTACAAGTGCCATGCCATCTCAGTTTGGCACTTCAAACTCCAAGGCAGTTCACCTTCCTTTTGCCCTTTCAAACAACACTTCAGCCTCCAAAAGAACACTCTCAACACTGTATAACTGGAATGATGATAGTGATGAGAAGCACTTCAATTTGGACTGTAATGGGAATGTGAGTGTTGTGAGGACTGAAGACAACAATGCTACTCCTGGCTCCTTTGCTACTCTGCTTAACCAGCTACCACAAACACCTTCATTGCCTCAAATAGGGTCTATGGGAGATGGGTTACTTAGGACACAATATCAAATACAAGGAACTAATTGGTATGGTTAA 1071 0.4669 MDSTEDSSTSSQHQPNLPPGFRFHPTDEELVVHYLKKKVDSVPLPVSIIADVDLYKFDPWELPAKASFGEEEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPICSGIQKVGVKKSLVFYGGKPPKGVKTDWIMHEYRLAETKPNNRPPGCDLGHKKNSLRLDDWVLCRIYKKGNTQRSPMDHERDDSMDDMIGEVPPSINVGHMNARFHLSKMSTNYSGALLENDRNTLEGVVIGNGVNGISTTTSAMPSQFGTSNSKAVHLPFALSNNTSASKRTLSTLYNWNDDSDEKHFNLDCNGNVSVVRTEDNNATPGSFATLLNQLPQTPSLPQIGSMGDGLLRTQYQIQGTNWYG* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1536 356 Gene3D NAC domain 26 180 IPR036093 GO:0003677|GO:0006355
Pvu11g1536 356 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 334 - -
Pvu11g1536 356 SUPERFAMILY NAC domain 8 176 IPR036093 GO:0003677|GO:0006355
Pvu11g1536 356 Pfam No apical meristem (NAM) protein 18 142 IPR003441 GO:0003677|GO:0006355
Pvu11g1536 356 ProSiteProfiles NAC domain profile. 17 176 IPR003441 GO:0003677|GO:0006355
Pvu11g1536 356 MobiDBLite consensus disorder prediction 1 22 - -
Pvu11g1536 356 MobiDBLite consensus disorder prediction 1 17 - -
Pvu11g1536 356 PANTHER NAC TRANSCRIPTION FACTOR 56 1 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1536 Pvu-Chr11 38544967 38547407 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1536 1 355 NAC Transcription Factor Family AT3G15510 53.421 2.01e-113 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu11g1536 NAM 2.5e-39 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1536 - - gmx:100811670 608.216