Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1526 ATGCACATTCTTACTTTCATGATTATGGTTGCATGCATACTTGTTCCCTCTCTCAAAATTTCCATAGCAAATAGTTCGATAAAAGTGTCTCAAGTCCTGAGGGATGAGCAGACCTTGGTGTCAAATGGTGGAAAGTTTGAATTAGGGTTCTTCAGCCCGGGTAATTCCCAGAAACGTTACCTGGGCCTTTGGTACAGGAACATCCCAGTTCAGAAAGTCCTTTGGGTTGCTAATAGAGCCAACCCCATCAATGATTCTTCTGGTATCTTAACACTGAACCCCACAGGAAATCTTGTTCTCACCCAAAATGGATCTGTTGTTTGGCACACCAACACTCTCAAACAAGCACAGAATCCAGTGGCTGTGCTCCTAGACAGTGGCAATCTTCTTATAAGAAACGAAGGAGAAACAAAGGAAGAAGAATATTTGTGGCAAAGCTTTGACTATCCCTCTGACACACTCTTCCCTGGGATGAAGTATGGACAAGACCTCCGAACTAGTCTTGAATGGAGTTATACTGCGTGGAAGAGTCCAGAAGACCCATCCCCAGGAGAGGTTTCTAGGGTCTTAAAACTCTACAACTATCCTGAGTTTTATACCATGAAGGGAACACAAAAATGGTTCAGGTTTGGACCTTGGAATGGCCTATATTTTAGTGGAACACCAGATCTACAGAACAACACCGTTTTTGAGTTCAATTTTGTCAGCAACAAGGAGGAGATATATTACACCTATAGCCTTGCAAATGATTCTGTGCTCTCCATAAATGTAATAAACGAAACCGGTACACTTTCTGGGTACGTGTGGGTGGAGGGTGGCCAAAATTGGAGGACATGTAGATACCTCCCAAATGAGATTTGTGACAACTATGGCCTTTGTGGACCCTATGGAAACTGCGTAACAACCCAATCACAAGTGTGCCAATGTTTGAAAGGTTTCAATCCAAAGTCACCTCAGAAATGGTACTCATCGGATTGGACTGAAGGATGTGTCCGTAATACACCGTTAATTTGCAATGGTACAGACAAAGGTGGGTTTCTGAAATTTGAAGGGCTGAAAGTTCCAGATACTACACATACTTGGTTGGATGAGAGTATCGGTCTAGAAGAATGCAGAGTGAACTGTTTGAATAATTGTTCTTGCATGGCCTATACAAATTCAGACATAAGAAATGGAGGTAGTGGATGTGTCATGTGGTTTGGAGATCTCATTGACATGAGACAGTTTCAAACTGGTAAGCAAGACCTATATATAAGGATGGCTGCTTCTGAGTTAGGGTCTGTATATAGCCACAACAAGATCAAGACGCTTCCAATAGTTGTTTCCACCGTTGCAGCAGTTTGTGGCGTTCTATTATGTTCCTATTTATTCTGCAGAATTCGGAGGAACAAATCTGAAAAATCATTGTCAGAAGAACACCATGAAAAACAAGTGGATGATCTGGACGTTCAATTGTTTGATCTATTCACAATTGCAACTGCCACTAACGACTTCTCAGCAGAAAATAAGATTGGAGAAGGTGGTTTTGGACCTGTGTACAAGACTCTCTCAAGGAGCTCATGGCAAGGAGTGACAGAGTTCATAAATGAAGTCAAATTGATTGCAAAACTTCAGCACCGAAATCTTGTAAAACTTATTGGTTGTTGCATTCAAGGACAAGAAAAAATGTTAGTTTATGAATACATGGCAAATGGAAGCCTAGATTCCTTCATATTTGATGATACAAAAAGTAATTTGCTAGAGTGGCCTCAGAGCTTCCACATAATATGTGGAATTGCAAGAGGGCTTATGTATCTTCATCAAGACTCCCGTTTGAGGATTATTCATAGAGATCTCAAAGCAAGTAACGTGCTTCTTGATAAAAATTTGAGCCCTAAAATATCCGACTTTGGATTGGCCAGAATTTTTGGAGGGGACCAGATTGAAGGAAACACAAGAAGAGTAGTTGGGACATATGGGTATATGGCACCAGAGTATGCTGTTGATGGATTATTTTCTGTGAAATCAGATTTCTTCAGCTTTGGCATTTTACTGTTGGAGATTGTATGTGGAAAGAAAAATAGAGGATTTTATCACACAGATGGGAGTCTTAACCTAGTTGGTCATGCATGGACACTATGGAAGAAGGGGAGGGCAATGGAGTTGGTTGATTCCAACAAGATGGAGTCGTGTATTATAGCAGAAGTTCTGCGTTGTCTCCATGTTAGTCTTTTGTGTGTGCAGCAGTACCCAGAAGATAGGCCAACAATGGCGTCCGTGATTCTAATGTTGGAGACTCAAATGGAACTGGTTGAGCCCAAAGAACACGGTTTCATTTCGAGAAATGTTTTAGCTGAAGAAGATTTACGGTTAAATTCGAAAGACACGAGTTCAAGCAACCATGTAACAATAACCATGTTAGAGGCCCGATAA 2412 0.4113 MHILTFMIMVACILVPSLKISIANSSIKVSQVLRDEQTLVSNGGKFELGFFSPGNSQKRYLGLWYRNIPVQKVLWVANRANPINDSSGILTLNPTGNLVLTQNGSVVWHTNTLKQAQNPVAVLLDSGNLLIRNEGETKEEEYLWQSFDYPSDTLFPGMKYGQDLRTSLEWSYTAWKSPEDPSPGEVSRVLKLYNYPEFYTMKGTQKWFRFGPWNGLYFSGTPDLQNNTVFEFNFVSNKEEIYYTYSLANDSVLSINVINETGTLSGYVWVEGGQNWRTCRYLPNEICDNYGLCGPYGNCVTTQSQVCQCLKGFNPKSPQKWYSSDWTEGCVRNTPLICNGTDKGGFLKFEGLKVPDTTHTWLDESIGLEECRVNCLNNCSCMAYTNSDIRNGGSGCVMWFGDLIDMRQFQTGKQDLYIRMAASELGSVYSHNKIKTLPIVVSTVAAVCGVLLCSYLFCRIRRNKSEKSLSEEHHEKQVDDLDVQLFDLFTIATATNDFSAENKIGEGGFGPVYKTLSRSSWQGVTEFINEVKLIAKLQHRNLVKLIGCCIQGQEKMLVYEYMANGSLDSFIFDDTKSNLLEWPQSFHIICGIARGLMYLHQDSRLRIIHRDLKASNVLLDKNLSPKISDFGLARIFGGDQIEGNTRRVVGTYGYMAPEYAVDGLFSVKSDFFSFGILLLEIVCGKKNRGFYHTDGSLNLVGHAWTLWKKGRAMELVDSNKMESCIIAEVLRCLHVSLLCVQQYPEDRPTMASVILMLETQMELVEPKEHGFISRNVLAEEDLRLNSKDTSSSNHVTITMLEAR* 804
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1526 803 ProSiteProfiles Protein kinase domain profile. 498 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1526 803 ProSiteProfiles Bulb-type lectin domain profile. 24 144 IPR001480 -
Pvu11g1526 803 Gene3D - 19 147 IPR036426 -
Pvu11g1526 803 SUPERFAMILY Protein kinase-like (PK-like) 483 759 IPR011009 -
Pvu11g1526 803 Pfam Protein tyrosine and serine/threonine kinase 521 754 IPR001245 GO:0004672|GO:0006468
Pvu11g1526 803 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Pvu11g1526 803 PANTHER - 26 800 - -
Pvu11g1526 803 PIRSF SRK 1 803 IPR024171 GO:0004674
Pvu11g1526 803 ProSitePatterns Serine/Threonine protein kinases active-site signature. 607 619 IPR008271 GO:0004672|GO:0006468
Pvu11g1526 803 SMART serkin_6 498 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1526 803 Pfam PAN-like domain 341 406 IPR003609 -
Pvu11g1526 803 CDD B_lectin 30 150 IPR001480 -
Pvu11g1526 803 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 181 IPR036426 -
Pvu11g1526 803 Pfam D-mannose binding lectin 73 176 IPR001480 -
Pvu11g1526 803 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Pvu11g1526 803 Gene3D Phosphorylase Kinase; domain 1 458 561 - -
Pvu11g1526 803 CDD PAN_AP_plant 334 421 - -
Pvu11g1526 803 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 26 800 - -
Pvu11g1526 803 Gene3D Transferase(Phosphotransferase) domain 1 562 773 - -
Pvu11g1526 803 SMART ntp_6 341 420 IPR003609 -
Pvu11g1526 803 Gene3D Hepatocyte Growth Factor 338 420 - -
Pvu11g1526 803 SMART blect_4 30 150 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1526 Pvu-Chr11 38170069 38176211 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1526 440 771 Receptor kinase-like Gene Family AT4G23230 51.594 8.44e-116 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1526 PK_Tyr_Ser-Thr 1.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1526 - - gmx:100802962 1245.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0917 5 24355969 24359850 Pvu11g1526 11 38170069 38176211 PCT