Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1525 ATGGGTATTATTCTTACTTTTTCTATAATATTTGCATGCATACTTGTTTTCTCACTAGAAATTTCCGTAGCAAATGATTCAATCAACGTGCTCCAGTCCCTGAGTGATGGGAAGACTTTGGTATCAGAAGGTGGAAAGTTTGAACTAGGGTTCTTCAGCCCTGGTAGTTCCCAGAAACGATACTTGGGAATTTGGTACAAGAATATCCCAGATAAGACATTTGTTTGGGTTGCTAATGGGGCCAACCCCATCAATGATTCCTCAGGCATCTTAACAGTGAACACCACAGGCAATCTTGTTCTCACTCAAAATGGTTCTCTTGTTTGGCACACCAGCTCTCAGAAACAAGCACAGAATCCGGTGGTAGAAATGTTGGACAGTGGCAATCTTGTGGTCAGAAACGAGGGGGAAACAAACCCAGAAGAGTATTTGTGGCAAAGCTTTGACTATCCATCTGATACACTCTTGCCAGGGATGAAGTTAGGATGGGACCTCCGAACTGGTTTTGAACGGAAATATACTGCATGGAAGAGTCCAGATGATCCATCCCCAGGTGATGTGTCTCGGGTTATGAAACTCTACAGCTATCCTGAGATTTATATGATGAAGGGTACACAAAAGTTGCTGAGGTATGGACCTTGGAATGGCGAATATTTCAGCGGAATGCCAGATCTGCTGAATAACACCATTTTTGACTTGAGTTATGTCAGCAATGAAGATGAGATTTACTACACCTATACACTCGTGAATGATTCTGTCCTCTCCAGAACTGTAACAAACCAATCAGCTACTATTGATCGTTATGTATGGCAGGAGGTTGAGAAAATATGGAAAATATATAGATCCTACCCGAAAGAGTTTTGCGACAAGTACGACTCGTGTGGACCCAACGGATTATGTGTACGAACTCAGTCACAATCTTGCACATGTTTGGAAGGTTTCAGTCCAAAATCACAACAAAATTGGATCTCATCGGATTGGAGTGGAGGATGTGTGCGCAATAAAGCGTTGAATTGCAGTCATGATGTGTTTGTCAAATATGAAGGGCTGAAAGTTCCAGCTACTACAAATACTTTGTTGAATAAGAGTCTTGGCCTCAAGGAATGCGAAGTGAAGTGTTTGAATAATTGTTCTTGTATGGCCTACACTAATTCAGATATAAGAAATGGAGGCAGTGGTTGTGTCCTGTGGTTTGGAGATCTCATTGACATGAAACAGTTTGAAACTGGTGGGCAAGACCTGTATATCAGGATGAATGCTTCGGAGGCTGTCAATTCCAACTCTCAAGAACCTGTACCAAGCAAAGAACCTGTACCAAGCAAAGAACCTGGCAACAACAACAACAACAGACGAACGATAGTCGCTTCAACGGTTGCTGCAGTTTCTGGTTTTCTTATTCTTCTGATTACTTGTATCATTTGCAGGCTTCATAGGAACAATGCTGGAAATTCATCAACAGAAGATAACAACAATAAGAGACATGTGGATGATCTGGACGTCCAAATGTATGATCTTGTAACAATTGTAAAAGCCACTAATAACTTCTCCACAGAGAATATCATAGGAGAAGGTGGTTTTGGACGTGTATACAAGGGAATAATCGACAGCCAAGAAATTGCTGTGAAGACTCTATCAAGGAACTCATGGCAAGGTGTGACAGAGTTCATCAATGAAGTAAACTTGACTGCAAAGCTTCAGCATCGGAATCTTGTTAAACTTCTTGGTTGTTGCATTGAAGGAGAAGAAAGAATGCTCATTTATCAGTACATGGAAAATGGCAGCCTAGACTCCCTCATTTTTGGTGACAAAAGCAGTAAATTGCTGGAGTGGCCTCAACGATTCCAAATAATTTTGGGAGTTTCAAGGGGCCTTATGTACCTTCATCAAGATTCACCACTGAGGATCATCCACAGAGATCTCAAAGCTAGTAACATCTTACTCGATAAAACGTTGAATCCGAAAATATCAGATTTTGGTGTATCAAGATCTTTTGGAGTAGACCAACTTGAAGGAAGCACAAGTAAAGTAGTAGGGACCTGTGGGTATATGGCGCCAGAATATGCAGTTGATGGATTGTTTTCTGAAAAATCTGACGTCTTCAGCTTTGGCATTCTGGTGTTGGAGATTATTTGTGGGAAGAGAAATAGAGGACTTTATCAGCAGACAAGAGTCTTAAACCTTGTTGCTCATTCATGGACATTATGGAAAGCGGGCAAGGGAATAGATTTGATTGCCTCAAACATGAAGATGTCATCGTGCGTTATATCTGAAGTACTGCGTTGTCTCCATGTCGGTCTTTTGTGTGTGCAACAGTACCCAGATGACAGGCCTACAATGATGTCAGTGATTCTGATGTTGGAGAGTCACATTGAATTGGCTGAGCCCAAAGAACCTGCTTTCATTTCAAGAATTGTGTTACTTGAAGAAGATTTATATCCGAAAGATACAAGCTCAACCAATGAAGTCACCGTTACCATTTTAGAACCTCGATGA 2493 0.4124 MGIILTFSIIFACILVFSLEISVANDSINVLQSLSDGKTLVSEGGKFELGFFSPGSSQKRYLGIWYKNIPDKTFVWVANGANPINDSSGILTVNTTGNLVLTQNGSLVWHTSSQKQAQNPVVEMLDSGNLVVRNEGETNPEEYLWQSFDYPSDTLLPGMKLGWDLRTGFERKYTAWKSPDDPSPGDVSRVMKLYSYPEIYMMKGTQKLLRYGPWNGEYFSGMPDLLNNTIFDLSYVSNEDEIYYTYTLVNDSVLSRTVTNQSATIDRYVWQEVEKIWKIYRSYPKEFCDKYDSCGPNGLCVRTQSQSCTCLEGFSPKSQQNWISSDWSGGCVRNKALNCSHDVFVKYEGLKVPATTNTLLNKSLGLKECEVKCLNNCSCMAYTNSDIRNGGSGCVLWFGDLIDMKQFETGGQDLYIRMNASEAVNSNSQEPVPSKEPVPSKEPGNNNNNRRTIVASTVAAVSGFLILLITCIICRLHRNNAGNSSTEDNNNKRHVDDLDVQMYDLVTIVKATNNFSTENIIGEGGFGRVYKGIIDSQEIAVKTLSRNSWQGVTEFINEVNLTAKLQHRNLVKLLGCCIEGEERMLIYQYMENGSLDSLIFGDKSSKLLEWPQRFQIILGVSRGLMYLHQDSPLRIIHRDLKASNILLDKTLNPKISDFGVSRSFGVDQLEGSTSKVVGTCGYMAPEYAVDGLFSEKSDVFSFGILVLEIICGKRNRGLYQQTRVLNLVAHSWTLWKAGKGIDLIASNMKMSSCVISEVLRCLHVGLLCVQQYPDDRPTMMSVILMLESHIELAEPKEPAFISRIVLLEEDLYPKDTSSTNEVTVTILEPR* 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1525 830 Pfam D-mannose binding lectin 73 177 IPR001480 -
Pvu11g1525 830 ProSitePatterns Serine/Threonine protein kinases active-site signature. 635 647 IPR008271 GO:0004672|GO:0006468
Pvu11g1525 830 PANTHER - 12 829 - -
Pvu11g1525 830 SMART ntp_6 339 418 IPR003609 -
Pvu11g1525 830 PANTHER S-LOCUS GLYCOPROTEIN DOMAIN, PAN/APPLE DOMAIN PROTEIN-RELATED 12 829 - -
Pvu11g1525 830 ProSiteProfiles Protein kinase domain profile. 515 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1525 830 Pfam S-locus glycoprotein domain 210 318 IPR000858 GO:0048544
Pvu11g1525 830 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
Pvu11g1525 830 CDD B_lectin 32 151 IPR001480 -
Pvu11g1525 830 PIRSF SRK 1 830 IPR024171 GO:0004674
Pvu11g1525 830 Gene3D - 20 148 IPR036426 -
Pvu11g1525 830 SUPERFAMILY Protein kinase-like (PK-like) 500 787 IPR011009 -
Pvu11g1525 830 CDD PAN_AP_plant 337 417 - -
Pvu11g1525 830 ProSitePatterns Protein kinases ATP-binding region signature. 521 542 IPR017441 GO:0005524
Pvu11g1525 830 Pfam PAN-like domain 339 404 IPR003609 -
Pvu11g1525 830 Gene3D Transferase(Phosphotransferase) domain 1 590 799 - -
Pvu11g1525 830 CDD STKc_IRAK 521 787 - -
Pvu11g1525 830 Pfam Protein tyrosine and serine/threonine kinase 517 734 IPR001245 GO:0004672|GO:0006468
Pvu11g1525 830 SMART serkin_6 515 786 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1525 830 ProSiteProfiles Bulb-type lectin domain profile. 25 145 IPR001480 -
Pvu11g1525 830 SMART blect_4 31 151 IPR001480 -
Pvu11g1525 830 Gene3D Phosphorylase Kinase; domain 1 488 589 - -
Pvu11g1525 830 MobiDBLite consensus disorder prediction 425 449 - -
Pvu11g1525 830 ProSiteProfiles PAN/Apple domain profile. 339 419 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1525 Pvu-Chr11 38136903 38141286 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1525 421 830 Receptor kinase-like Gene Family AT4G23220 43.124 1.04e-107 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu11g1525 PK_Tyr_Ser-Thr 4.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1525 - - vra:106754325 1352.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0918 5 24398811 24403186 Pvu11g1525 11 38136903 38141286 PCT