Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1512 ATGGCGACGAGGGCAGCAGTGGCGGCGCCACACGTTTTGCGACGCTTCTTCTGCTCAAACTCCGCTTCTTCTTCTTTCCCCTTCGTTCCTACACCGCCTCTGGGCGCCGTCCCCAGCCCCGCCCGACCCACGGCGGAGCCCAACAACAACCTCTTTGTCTCCGGGCTTAGCAAACGAACTACTACAGAAAAGCTTCGGGAAGAATTTTCAAAGTTTGGTGAAGTTGTTCATGCAAGGGTGGTAACTGATCGAGTCTCAGGCTACTCTAAGGGGTTTGGTTTTGTGCAATATGCAACATTAGAAGAGGCTGCAAAGGGCATTGAAGGAATGGATGGCAAGTTTTTGGACGGCTGGGTTATATTTGCAGAGTATGCGAGACCAAGACCACCACCAGGACATTTAAATAACAACAGTCCTCAGTTTGGCCGGCAGTGA 435 0.5195 MATRAAVAAPHVLRRFFCSNSASSSFPFVPTPPLGAVPSPARPTAEPNNNLFVSGLSKRTTTEKLREEFSKFGEVVHARVVTDRVSGYSKGFGFVQYATLEEAAKGIEGMDGKFLDGWVIFAEYARPRPPPGHLNNNSPQFGRQ* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1512 144 PANTHER TRANSFORMER-2-RELATED 1 139 - -
Pvu11g1512 144 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 51 117 IPR000504 GO:0003723
Pvu11g1512 144 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 49 127 IPR000504 GO:0003723
Pvu11g1512 144 PANTHER GLYCINE-RICH RNA-BINDING PROTEIN 3, MITOCHONDRIAL-LIKE 1 139 - -
Pvu11g1512 144 Gene3D - 32 135 IPR012677 -
Pvu11g1512 144 SMART rrm1_1 50 123 IPR000504 GO:0003723
Pvu11g1512 144 SUPERFAMILY RNA-binding domain, RBD 41 140 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1512 Pvu-Chr11 37573399 37576531 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1512 48 126 Eukaryotic Initiation Factors Gene Family AT4G34110 37.975 4.78e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1512 - - gmx:100789351 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1512 11 37573399 37576531 Pvu11g1512 11 37573399 37576531 ECH