Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1477 AGCGGATGTTATAAGAAAGCATTTGCAGAACACGAAAATAGATTCAGAAAAGATGGAGTGAAGGTGGAGGAAACTCAGAGATGGAGAGAAGCTCTCACACAAGTGGCCAATCTCTCTGGTTGGGATATCCGAAATAAGCCACAATATGTACAGATTGAAGAAATTGTTCAGAAAATAATAAATATTTTGGGTCCCAAAATTTCAAGACTTCCAAAGGATGAATTAGTTGGAATAGAGTCTCGGGTTGAAGAATTAACAAATCTTTTGCGTTTTGGGTCACTTAACGATGTTCGAGTTGTTGGAATCAGTGGGATGGGTGGCATAGGAAAGACAACTCTTGCTTGGGCTTTATATGAAAGAATTTATCATCAATATGATTTTCATTGTTTTATTGATGACGTGAGCAAAATTTATCGAGATTCCAGCTCATTAGGTGTGCAAAAACAACTAATTTCCCAGTCTCTAAATGAGAAAAATCTTGAAATTTACAATGCTTTTGAGGGAACGTGTTTGGTGCATAGTAGGTTGCACAATGCAAGAACACTTGTAGTTCTTGACAATGTTGATCAAGTTGAACAACTTAACCTGTTTACAGGGAACAAAGGTAATATGGATGAACATATATTGAGGACACATAGAGTGGATGATGTTTATCAAGTGCAGCCGTTGAGATGGGAAAATGCTAAGCAGTTGTTTTGTAAAAATGCTTTCAAAGTTAATTATTTTTTAAGTCATCCCTTGGCAATTGAAGTAACTATGTCATCTTTGTTTGGTCAAAATGTCTCACAGTGTATAAGTGCATTGGATAGGCTAAGATCCAATAAAAGTAAAAATATTATTGAAGTTCTACGTATAAGTTTTGATGAGTTGGAAGAAGAAGAGAAAGAAATATTTCTTGATATTGCATGCTTCATCGATGGTGATGGGAGGATACACATGCATCGTTTGCTAAATGATTTGGCAACGAGTATTATTCGAGAAAAGTCACCTAAGGAGCCCATGAAGTGGAGTAGGTTGTGGGATTACAAAAATTTCCAAAAAAGCTATGCAAATGAAAATCTTCAAGTCGTAAATATTGAAGGGATGGTTTATGGACAAACAACAATGAGGGCAGATAGTTTATCAAAAATTAGACACCTTAAGTTGCTCAGCCTTTTTTCAGCAGACAAATTAGTTGAGTTACACCTCGTTCATAGTAGTATTCAACAACTATGGGAAGGCATAAAGCCACTACACAATTTGAAGCGTTTGGATCTCTCTTTCTCCGAAAATTTAGTTGAGATGCCAGATGTTAGAGAGGCCCAAAATCTTGAAAAGATAGAACTTGAAGAATGCATAGAGCTCCGAAAAATCAATCCATCAGTTGGTTTTCTGAGAAAGCTTGCTATTTTGAACTTGAAATTCTGCAAAAACCTAGTAAGCTTACCTAATACCATGATGGATTTGTGTCTCCTTTCTTGCGTTTCTCTGCCATCAATGGCAGTGTCCCAATCCTCATCAAGCCTCTTAGCCATGGCCCTTGTAGTTGGCCCAATATGTCTTGATGTTTGGCTCTCTTTTGGGTTGGTGCTTGGTCCTCTTCCATCATCCCCTCCCCCTTGGAAAGGATTTGTCCTCAAATCCAAGATGTCATCTTCTTCATTAGTACCTACAAAAGGAGACAACCAAACTAAGTCTTTCCCTTGTTTGCATGAACTCAATCTAAACTTCTATAACTTAGTTCAAATCCCTGATGTCATTGGAAAGTTAAGTTGTCTAGAAAGGCTAAATTTGAAGGGAAACAATTTTGATACACTTCCCAACCTCAAAGACCTTTTCAGACTGTATTATTTAAACTTACAACATTGCAAGCAATTCAAATACTTGTTTCATCTCCCTTCACGAACCAACTTCCCCTCAAAACTTTACACACGTAAAACCTCATATTTAAAAGGATTTGAAGAGACTATGGTAGGATTAAACTTTTTCAACTGCCTAGAATTAGTTTTGAGGGAACGCTTCACTAGCATGATTTTTTCATGGATGATACAAGTTATTCAGGCGTTCCACCAATGCAAATGTCTAACATCCATTCCATTCACTCCAACTATTCAAAGTGTTATCCCTAGAACAGAAATACCGAAATGGTTCAACAATCAGTTTGTGAGCATACACAATTTAATAGAGATTGATGCCTCTCCTATTGTGCATCACAATAATTGGATTGGTGTGGTGTGTTGTGTAATATTCCACCCAGGCAAAAAACTGGAGATGTGTTTGTTGGTCATTGAACAGTTAGATCATATGTGGTTATTCTATTTCACTCGGGAAGGGTTCGGTGAAAAATATTGTGAATTGAAATTTGGAATAACGAACACTACATATTTTTTATACAAGGCTGAATTGAAGAAATATGGGTATCGCTTTGTATATGAACAAGATCTACAACCATGA 2433 0.3674 SGCYKKAFAEHENRFRKDGVKVEETQRWREALTQVANLSGWDIRNKPQYVQIEEIVQKIINILGPKISRLPKDELVGIESRVEELTNLLRFGSLNDVRVVGISGMGGIGKTTLAWALYERIYHQYDFHCFIDDVSKIYRDSSSLGVQKQLISQSLNEKNLEIYNAFEGTCLVHSRLHNARTLVVLDNVDQVEQLNLFTGNKGNMDEHILRTHRVDDVYQVQPLRWENAKQLFCKNAFKVNYFLSHPLAIEVTMSSLFGQNVSQCISALDRLRSNKSKNIIEVLRISFDELEEEEKEIFLDIACFIDGDGRIHMHRLLNDLATSIIREKSPKEPMKWSRLWDYKNFQKSYANENLQVVNIEGMVYGQTTMRADSLSKIRHLKLLSLFSADKLVELHLVHSSIQQLWEGIKPLHNLKRLDLSFSENLVEMPDVREAQNLEKIELEECIELRKINPSVGFLRKLAILNLKFCKNLVSLPNTMMDLCLLSCVSLPSMAVSQSSSSLLAMALVVGPICLDVWLSFGLVLGPLPSSPPPWKGFVLKSKMSSSSLVPTKGDNQTKSFPCLHELNLNFYNLVQIPDVIGKLSCLERLNLKGNNFDTLPNLKDLFRLYYLNLQHCKQFKYLFHLPSRTNFPSKLYTRKTSYLKGFEETMVGLNFFNCLELVLRERFTSMIFSWMIQVIQAFHQCKCLTSIPFTPTIQSVIPRTEIPKWFNNQFVSIHNLIEIDASPIVHHNNWIGVVCCVIFHPGKKLEMCLLVIEQLDHMWLFYFTREGFGEKYCELKFGITNTTYFLYKAELKKYGYRFVYEQDLQP* 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1477 810 Gene3D Ribonuclease Inhibitor 543 734 IPR032675 -
Pvu11g1477 810 Gene3D - 60 222 IPR027417 -
Pvu11g1477 810 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 809 IPR044974 GO:0006952
Pvu11g1477 810 Gene3D - 1 59 IPR035897 -
Pvu11g1477 810 ProSiteProfiles Leucine-rich repeat profile. 585 606 IPR001611 GO:0005515
Pvu11g1477 810 Gene3D Ribonuclease Inhibitor 343 504 IPR032675 -
Pvu11g1477 810 PRINTS Disease resistance protein signature 99 114 - -
Pvu11g1477 810 PRINTS Disease resistance protein signature 175 189 - -
Pvu11g1477 810 PRINTS Disease resistance protein signature 409 425 - -
Pvu11g1477 810 SUPERFAMILY L domain-like 313 634 - -
Pvu11g1477 810 Pfam NB-ARC domain 80 237 IPR002182 GO:0043531
Pvu11g1477 810 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 59 301 IPR027417 -
Pvu11g1477 810 Pfam C-JID domain 702 808 IPR045344 -
Pvu11g1477 810 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 4 809 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1477 Pvu-Chr11 34145620 34153099 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1477 74 658 WRKY Transcription Factor Family AT5G45050 26.050 4.30e-41 161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1477 - - pvu:PHAVU_011G142400g 1580.84