Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1476 ATGGACTTGAATGAGTTTTTAAGTGTCGGTGTGACTAGTTCGACTGGAATCCCTTGCACATCATCTTATACTCCTATTTCATCAATACCCAACAGATTGCTTGGATCCTTGAAACACGACATAGAATACTCTCCTAATTCGGCCCTTTCTACTCATTTTGATTCTGATGCTCTTTCTTCTGCACTAAGTGACGGCCAGGAACAGCACACCGGTGGGGAAATTCACTCTGGTGTAAACCCTTTGCAGGAAAGCAATCATTATTTGTATAGGCCAGTCTCATCCGTGGACCATCTCCAAGATGGCATGCAACTATCTACTAGATGCTTTTTTCCACAGGATATAAGTTATGACCATGAGACTAGATTTGCATTGCAGGAATTAGAAACTACTTTGATGGCACCTGATGGTGATGATCAAGTCACCACATCAAGCACTTCTTTGGGTGTTAGCAGAAGGCCTACAACATCTGGCCAGAGAAACAGGTCCTGGAGCCATGAGGGTCAGCCAAGTGATGTTGCACGTGTAGGTAAGCGTCACAAATCAACCGAGGAAGTATCACTACAAGGATCCCCTTCAACCAATTTGAAACAATTGCTGATTGTATCTGCCAAAGCCTTGTCTGAAAACAACATAAAAGATTTTGATCAATTGATAGAAAAGGCTAGAAGTGTTGTGTCTATAACTGGGGAGCCAATCCAGCGCCTTGGTGCTTATTTGGTGGAAGGGCTTGTTGCAAAGAAGGAGGCATCAGGAAATAACATCTACCATGCCCTTAGATGCAGAGAACCTGATGGAAAAGACTTGCTCTCTTACATGCAGCTTCTGTATGAAATATGTCCCTACTTAAAATTTGGTTACATGGCTGCCAATGGCGCCATTGCTGAAGCTTGTAGAGATGAGGATCACATTCATATCATAGACTTTCAGATTGGTCAGGGAATTCAATGGTGGACACTTCTTCAAGCTCTTGCAGCAAGACCTGGTGGAGCTCCTCGTGTGCGGATCACAGGGATTGATGACCCCCTTTCTAAATATGTTCGTGGTGATGGATTAGAAGCCGTTGGAAAAAGGTTGGCTGAAATATCTCAGACATTTAACATCCCAGTTGAGTTCCACAGTGTGCCTGTTTTAGCTCCATATGTCACAGAAGACATGCTTGACATTAGGCCTGGTGAGGCTTTGGCTGTGAATTTCTCTTTGCAACTCCACCACACGGCTGATGAGAGTGTCGATATGAGCAATCCAAGGGATGGACTTTTGAGATTGGTGAAATCACTTTCTCCCAAGGTAACTACGTTGATTGAGCAAGAGTCAAACACTAATACCACTCCTTTCTTCAACAGGTTTATAGAAACCTTGGATTACTACTTGGCAATTTTTGAGTCCATTGATGTGTCTCTTGCAAGAAAGAGCAAGGATCGAATTAATGTGGAACAACATTGTCTGGCACGGGATATTGTCAATATTATTGCTTGTGAAGGGAAGGAAAGGGTAGAGAGACATGAACTGTTAGGCAAGTGGAAGTCTAGGTTGACAATGGCTGGCTTTTCTCAATATCCTTTGAGTTCATACGTGAATTCTGTCATAAGGAGCCTGCTTAGGTGCTATTCAGAACATTATAATCTTGTGGAGAAGGATGGGGCCATGTTGTTGGGATGGAAGGACAGAAATTTGATTTCAGCTTCAGCATGGCATTGA 1698 0.4317 MDLNEFLSVGVTSSTGIPCTSSYTPISSIPNRLLGSLKHDIEYSPNSALSTHFDSDALSSALSDGQEQHTGGEIHSGVNPLQESNHYLYRPVSSVDHLQDGMQLSTRCFFPQDISYDHETRFALQELETTLMAPDGDDQVTTSSTSLGVSRRPTTSGQRNRSWSHEGQPSDVARVGKRHKSTEEVSLQGSPSTNLKQLLIVSAKALSENNIKDFDQLIEKARSVVSITGEPIQRLGAYLVEGLVAKKEASGNNIYHALRCREPDGKDLLSYMQLLYEICPYLKFGYMAANGAIAEACRDEDHIHIIDFQIGQGIQWWTLLQALAARPGGAPRVRITGIDDPLSKYVRGDGLEAVGKRLAEISQTFNIPVEFHSVPVLAPYVTEDMLDIRPGEALAVNFSLQLHHTADESVDMSNPRDGLLRLVKSLSPKVTTLIEQESNTNTTPFFNRFIETLDYYLAIFESIDVSLARKSKDRINVEQHCLARDIVNIIACEGKERVERHELLGKWKSRLTMAGFSQYPLSSYVNSVIRSLLRCYSEHYNLVEKDGAMLLGWKDRNLISASAWH* 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1476 565 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR 22 565 - -
Pvu11g1476 565 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 22 565 IPR005202 -
Pvu11g1476 565 MobiDBLite consensus disorder prediction 59 79 - -
Pvu11g1476 565 ProSiteProfiles GRAS family profile. 186 565 IPR005202 -
Pvu11g1476 565 MobiDBLite consensus disorder prediction 133 189 - -
Pvu11g1476 565 Pfam GRAS domain family 195 564 IPR005202 -
Pvu11g1476 565 MobiDBLite consensus disorder prediction 135 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1476 Pvu-Chr11 34129154 34132377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1476 118 564 GRAS Transcription Factor Family AT5G48150 56.473 1.80e-175 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu11g1476 GRAS 5.4e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1476 - - gmx:100775665 969.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1476 11 34129154 34132377 Pvu11g1476 11 34129154 34132377 ECH
Pvu5g0931 5 25846525 25848273 Pvu11g1476 11 34129154 34132377 PCT