Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1475 ATGAGAGAGGAGTCAATAGGGCTGATTATTGGGGTTTCCATAGGGGTGGTTATTGGACTAGTTTTGGCAATTTTTGCATTCTTCTGCCATAGGTATCATCGGAAGCGTTCACAGATAGGCAATAGCAGTTCTAGAAGGGCTGCTACCATTCCAATCCGCACACATGGTGCTGATTCTTGCACCATTCTATCAGACTCAACCTTAGGTCCAGAATCACCCATAAAGTCAGGAAGGTATGGCATGCCCTTCTGGCTTGAGGGGTTTAAGAAGAGTAGTAACATGGTCCCAGCATCTGGCCTACCTGAATATGCATACAAGGATTTGCAGAAAGCAACACATAATTTTACAACAGTCATAGGACAAGGTGCGTTTGGTCCTGTTTATAAAGCTCAGATGTCTACTGGTGAGACTGTTGCAGTTAAAGTTCTTGCAACTAATTCTAAGCAAGGGGAGAAAGAATTTCACACAGAGGTCATGTTGCTGGGAAGGTTACACCATAGAAATCTGGTGAATTTGGTTGGATATTGTGCAGAAAAGGGGCAACATATACTTGTATATGTATACATGAGTAAGGGTAGCTTGGCATCCCACTTGTATGGTAGTGATGTGAATGAAGCACTGTGCTGGGATTTGAGGGTTCACATAGCTTTAGATGTGGCAAGAGGCTTGGAGTATCTTCATGATGGGGCAGTTCCCCCTGTAATCCATCGAGACATCAAATCTTCCAATATTCTGTTGGATCAATCCATGCGAGCCAGGGTTTCTGATTTTGGACTTTCAAGAGAAGAGAAGGTGGATAAACATGCAGCTATTCGGGGTACCTTTGGCTATCTTGACCCTGAGTATATATCTTCAGGAACATTCACCAAGAAAAGTGATGTATACAGTTTTGGAGTGTTGCTCTTTGAAATTATAGCTGGCAGAAACCCTCAACAGGGTCTTATGGAATATGTTGAGCTTGCAGCAATGAACATCGAGGGAAAAGTTGGGTGGGAGGAGATTGTGGATTCTCACCTTCAAGGAAACTTTGATGTGAAGGAACTCAATGAAGTTGCAGCACTAGCCTACAAATGCATCAACCGTGCCCCAAATAAACGTCCTTCTATGAGGGATATTGTGCAAGTGCTAACAAGAATCCTCAAAGCAAGGCACCATGGGAATCATCACAAAAATTCCTTGTCAGCCACAGATGAAGTTTTCATTGATGCTGATCAGCTAGAGACCATGGTTTCAGTCACTGACCACAGAAGAGAAGAATCTAAGGATAATGCAACAGAGGTGTCTGATGAGTACAATGTTGTTTTATCTTAA 1311 0.4287 MREESIGLIIGVSIGVVIGLVLAIFAFFCHRYHRKRSQIGNSSSRRAATIPIRTHGADSCTILSDSTLGPESPIKSGRYGMPFWLEGFKKSSNMVPASGLPEYAYKDLQKATHNFTTVIGQGAFGPVYKAQMSTGETVAVKVLATNSKQGEKEFHTEVMLLGRLHHRNLVNLVGYCAEKGQHILVYVYMSKGSLASHLYGSDVNEALCWDLRVHIALDVARGLEYLHDGAVPPVIHRDIKSSNILLDQSMRARVSDFGLSREEKVDKHAAIRGTFGYLDPEYISSGTFTKKSDVYSFGVLLFEIIAGRNPQQGLMEYVELAAMNIEGKVGWEEIVDSHLQGNFDVKELNEVAALAYKCINRAPNKRPSMRDIVQVLTRILKARHHGNHHKNSLSATDEVFIDADQLETMVSVTDHRREESKDNATEVSDEYNVVLS* 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1475 436 SUPERFAMILY Protein kinase-like (PK-like) 91 376 IPR011009 -
Pvu11g1475 436 PANTHER CALCIUM/CALMODULIN-REGULATED RECEPTOR-LIKE KINASE 1 7 404 - -
Pvu11g1475 436 ProSiteProfiles Protein kinase domain profile. 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1475 436 Gene3D Transferase(Phosphotransferase) domain 1 189 403 - -
Pvu11g1475 436 PANTHER OS01G0253100 PROTEIN 7 404 IPR045271 GO:0004714|GO:0006468
Pvu11g1475 436 SMART serkin_6 113 380 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1475 436 ProSitePatterns Serine/Threonine protein kinases active-site signature. 234 246 IPR008271 GO:0004672|GO:0006468
Pvu11g1475 436 CDD STKc_IRAK 119 379 - -
Pvu11g1475 436 Pfam Protein tyrosine and serine/threonine kinase 115 376 IPR001245 GO:0004672|GO:0006468
Pvu11g1475 436 Gene3D Phosphorylase Kinase; domain 1 86 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1475 Pvu-Chr11 34099463 34104505 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1475 103 434 Glycoside Hydrolase AT3G07070 41.092 1.41e-73 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Pvu11g1475 PK_Tyr_Ser-Thr 2.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1475 - - gmx:100785634 770
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0932 5 25940356 25944699 Pvu11g1475 11 34099463 34104505 PCT