Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1473 ATGGAGAAGGAAGAAAAGAAGAAGACAAAGGGAAGCATTAAGGATAATATGCCAACAGTTTGGTTCTCTCTGAAGAAGTCTTTACACTGCAAATCTGAACCATCTGATGTTCATGACCCCAAAACAAGGAAGCACTTGAGCACAATCTTGACCAAGAGAGCAGGGAGGTCAGGGTGTTCTAGGTCCATAGCAAATCTCAAGGATGTTATCCATGGAAGCAAGAGGCATCTTGATAAGCCACCAAGTTGCAGTCCAAGATCCATAGGGAGCAGTGAGTTCCTCAACCCCATAACTCATGAGGTGATTTTAAGCAACTCAAGGTGTGAGCTGAAGATAACTGGGTATGGAGGCTTCCAAGAAGGGGTTGGCAGTGGTGGCAGCAATGCTGGTGGAGGTAGTGGTGGTTCAACTTTTGTGGGGACTTTGAGGCCAGGGACTCCTGGCCCTGGAGGGCACCCTACAATGCACTACTTTAATCCTTCTTTTAGGACCTCATCCACTCCTCCAAGGAAATCTCCTTTCCTCTTATCAGATAAAGAAGGGTCTGGTCCTCCTGGGCTTCAACCTAGCACTAGGTTGTCTCATGAGACAGATTCTAACGGGTCTTCAACTGTCACTTGCCACAAATGTGGAGAGCAATTCAACAAATGGGATGCTGCTGAAGCTCATCATCTGTCTAAGCATGCTGTGACTGAACTTGTGGAAGGAGATTCATCAAGGAAAATAGTGGAGATCATATGCAGGACTAGCTGGCTAAAGTCTGAAAACCAGTGTGGTAGAATTGAACGAGTTTTGAAGGTGCACAACATGCAAAAGACTCTTGCAAGATTTGAAGAGTACAGGGAGATGGTGAAGATCAAAGCCAGCAAGCTCCAGAAGAAGCATCCAAGATGTCTGGCTGATGGAAATGAGCTTTTGAGGTTTTATGGCACTACTGTGGCATGCTCTCTAGGCCTTAATGGCTCTTCTAGTCTCTGCCTATCAGAAAAGTGCTGTGTTTGCAGAATCATAAGGAATGGCTTTTCAGCAAAGAAAGAGCTCAAGGGTGGCATTGGAGTCTTCACAACATCCACAAGTGGAAGGGCTTTTGAGTCCATAGAGATTTTTGACGATGAACCATCACTGAGAAAAGCACTCATAGTGTGCAGAGTAATTGCTGGCAGGGTTCACAGGCCACTAGAAAACATTCAGGAAATGGCAGCACAAACAGGATTTGATTCATTGGCTGGGAAAGTTGGTCTATATTCAAACATTGAGGAGCTTTACTTGCTCAATCCTAGAGCTCTTCTTCCTTGCTTTGTGGTGATTTGCAAACCTTGA 1320 0.4523 MEKEEKKKTKGSIKDNMPTVWFSLKKSLHCKSEPSDVHDPKTRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLDKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKITGYGGFQEGVGSGGSNAGGGSGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSSTPPRKSPFLLSDKEGSGPPGLQPSTRLSHETDSNGSSTVTCHKCGEQFNKWDAAEAHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENQCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLQKKHPRCLADGNELLRFYGTTVACSLGLNGSSSLCLSEKCCVCRIIRNGFSAKKELKGGIGVFTTSTSGRAFESIEIFDDEPSLRKALIVCRVIAGRVHRPLENIQEMAAQTGFDSLAGKVGLYSNIEELYLLNPRALLPCFVVICKP* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1473 439 Gene3D - 219 438 - -
Pvu11g1473 439 PANTHER - 18 439 - -
Pvu11g1473 439 MobiDBLite consensus disorder prediction 187 204 - -
Pvu11g1473 439 ProSitePatterns Zinc finger C2H2 type domain signature. 207 228 IPR013087 -
Pvu11g1473 439 SUPERFAMILY ADP-ribosylation 230 438 - -
Pvu11g1473 439 MobiDBLite consensus disorder prediction 126 204 - -
Pvu11g1473 439 MobiDBLite consensus disorder prediction 158 172 - -
Pvu11g1473 439 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 18 439 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1473 Pvu-Chr11 34026598 34029254 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1473 17 439 C2H2 Transcription Factor Family AT5G54630 68.035 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pvu11g1473 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1473 - - gmx:100787790 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1473 11 34026598 34029254 Pvu11g1473 11 34026598 34029254 ECH