Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1472 ATGGGAATTCTAAAACATATGGTTAACAAAAGCTTAGGTGGTTTTTTGGTTCTTCTTCTTGTATCAGCAGTCAGCCCTTTGGAGAAGAAGGAAACCGAAGATGATTTTGTTAGGGAGTTACTTGATCCAGCATCTGGGTTATTCAATGAACACACGGCAAAGTTCTTATGGAAATATTGCAGGGAAGATTTATTTCATTTAATGAAAGATGTTGGGAATCATGATTTGTGTCTTTCAAAGGAATTATCTGGCATCACCAATATAATCAGTTCAGAGATTCAACCATTAGCACGAGAAGACACCAAAAAATTTATCAATGCTTACTGTTCTAAATTCAAGGAGAACATTCTTCATTGTTTGAGAAAAGATAATTTTCCAATACCTGTTTCAAGAAATGAGGATGGGCATGTTACTTATATGGGACCACTTTTTTCCCGATCCAGTGCTCCTACAAGAAATTTTGGTCGTAGTTTGCTTCAGCACATATCAGAACCACCTAGTCCAGGCCCTGCACCCAGTTCAGCACCATCTTCTGAACCCAGTCCAGCACCATCATCTGAACCCATACCAGTACCATCATCTCATGCTCCAGTACCTCATCATCTTCCTGAACCACTGCAACCTTCTTTCGCACCAACACCTTTTTTTCCAAAATGGACACCAGCAGCTTCAGATATTTCTGCTCCTCCATCTTCGGAAATTGACAAACAGGAAGATGGTCACAGTAATAAAAAAACAGTTGTTCTTGCGGTAGTTATAACTGCATTGGTGACATTTGTAGCTGCAGCACTGCTCTTTTTATGCTGGAGTCGGTATCGGAAGACTGGTCATGTTAGACTAAATGATGATAGGCCTCTTCTCAGCTTGAGCATGAGTGACTACTCTGTTGGTCCTTCCAGTTTTTCTTTTGGGAATTCAATAAAAGGGGAGAAACTTGGGTTTCAGTCATCTAGTAATAGTTTAGTAGACGATAAGAAGTACTCGGTGCAAGAAAGTCAATCAATAGGAGCTCTTAATGCTGCTACAGGATCACCATTTGAACTGAAACCTCCTCCCGGGAGGGTGGGAATCATTCCTTCTGGAATGCCTCCCTTAAAACCTCCTCCAGGCAGGTTAAACCCTCCTCCAGGTAGGTTAAACCCTCTTCCTCCTGAGCCACCTTCATTTAGGCCGTCGGATGCTGCTGCTCCTCCGGTGTCTACTACTACTGTTGCTGCAGTTCCTCCTCCTACCCCTCAAAAGTTTGCTATTAGTAGCATTCCACCACGCCAACCACCAATGGGTGCCAAACCTAGCCCGCCTCTACCACCACCGCCAGCACTAGCTGGTTCCAGACCAGGTTATCCTCCACCCCCTCCAGCACTAGCTGTTTCCAGACCTGGTCCTCCTCCTCCACCACCCCCTGCAGCCCCAGCTGGTATCAGACCTGGTCCTCCTCCACCACCACCCCCTGCAGCCCCAGCTGGTATCAGACCTGGTCCTCCTCCACCACCACCCCCAGCACCAGGTGGTGCCAAACCTGGTCCCCGCCCACCACCACCTCCTGTGAATGGTGTAGCTCCTCCTCGACCTCCTCCATTTGGCTCAAAGGCGCCACGGCCTTTAGCTAGTGGATCAAAAGCTACAGTTGCAAGTGAAGCTGATGCTCCCAAAGCCAAGCTAAAGCCCTTTTTCTGGGATAAGGTTCAAGCAAACCCAGATCAATCGATGGTTTGGAATCAAATCAAATCAGGATCATTCCAGTTTAATGAAGAAATGATAGAGACACTTTTTGGCTATAATGCTGTGGATAAGAACAATGGTCAAAGACAGAAAGAGTCTTCCTCTCAAGATCCTTCACCTCAGTTTGTCCAGATCATTGACAAAAAGAAAGCCCAAAATTTATTGATTCTGTTGCGAGCATTGAATGTGACAATGGAAGAAGTTCGTGATGCACTTTATGAAGGACATGAGCTACCCTCGGAATTCCTTCAAACTTTGCTAAAGATGGCACCAACATCAGATGAAGAGCTTAAGCTTAGACTCTTTGGTGGTGATCTATCTCAACTTGGTCCTGCTGACAGTTTCCTCAAAGCCCTGGTTGACATTCCATTTGCATTCAAGAGAATGGAAGCTCTGCTTTTCATGGGCTCATTTAAAGAGGAGCTTGGAACTACTATGGAGTCTTTTTCCATTTTGGAGGATGCTTGTAAGCAACTAAGAAGTAGCCGGCTGTTCCTGAAACTTCTTGAAGCTGTTCTCAAAACTGGCAACCGAATGAATGATGGAACTTTCCGCGGTGGTGCTCAAGCATTTAAACTTGATACACTTTTGAAATTATCTGATGTAAAAGGAACAGACGGGAAGACTACACTCTTACACTTTGTTGTTCTAGAGATTATCCGCTCTGAGGGCATAAAAGCTGTCAGAAAGTCCAAAGATAGCCAGAGTTTATCCAGTATTAAATCGGATGACCTTCAGGATAGTATTCAAGAAACAGAAGATCACTACCATGAGATCGGCCTTCAGGTGGTTTCACGCTTGAGCAGTGAACTTGAGAATGTAAAAAAGCAGCAGCTATAG 2562 0.4469 MGILKHMVNKSLGGFLVLLLVSAVSPLEKKETEDDFVRELLDPASGLFNEHTAKFLWKYCREDLFHLMKDVGNHDLCLSKELSGITNIISSEIQPLAREDTKKFINAYCSKFKENILHCLRKDNFPIPVSRNEDGHVTYMGPLFSRSSAPTRNFGRSLLQHISEPPSPGPAPSSAPSSEPSPAPSSEPIPVPSSHAPVPHHLPEPLQPSFAPTPFFPKWTPAASDISAPPSSEIDKQEDGHSNKKTVVLAVVITALVTFVAAALLFLCWSRYRKTGHVRLNDDRPLLSLSMSDYSVGPSSFSFGNSIKGEKLGFQSSSNSLVDDKKYSVQESQSIGALNAATGSPFELKPPPGRVGIIPSGMPPLKPPPGRLNPPPGRLNPLPPEPPSFRPSDAAAPPVSTTTVAAVPPPTPQKFAISSIPPRQPPMGAKPSPPLPPPPALAGSRPGYPPPPPALAVSRPGPPPPPPPAAPAGIRPGPPPPPPPAAPAGIRPGPPPPPPPAPGGAKPGPRPPPPPVNGVAPPRPPPFGSKAPRPLASGSKATVASEADAPKAKLKPFFWDKVQANPDQSMVWNQIKSGSFQFNEEMIETLFGYNAVDKNNGQRQKESSSQDPSPQFVQIIDKKKAQNLLILLRALNVTMEEVRDALYEGHELPSEFLQTLLKMAPTSDEELKLRLFGGDLSQLGPADSFLKALVDIPFAFKRMEALLFMGSFKEELGTTMESFSILEDACKQLRSSRLFLKLLEAVLKTGNRMNDGTFRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVLEIIRSEGIKAVRKSKDSQSLSSIKSDDLQDSIQETEDHYHEIGLQVVSRLSSELENVKKQQL* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1472 853 Gene3D Formin, FH2 domain 540 853 IPR042201 -
Pvu11g1472 853 SMART it6_source 544 853 IPR015425 -
Pvu11g1472 853 MobiDBLite consensus disorder prediction 341 549 - -
Pvu11g1472 853 MobiDBLite consensus disorder prediction 159 204 - -
Pvu11g1472 853 PANTHER FORMIN-RELATED 468 851 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu11g1472 853 PANTHER FORMIN-RELATED 1 467 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pvu11g1472 853 MobiDBLite consensus disorder prediction 424 531 - -
Pvu11g1472 853 MobiDBLite consensus disorder prediction 165 204 - -
Pvu11g1472 853 Pfam Formin Homology 2 Domain 546 850 IPR015425 -
Pvu11g1472 853 ProSiteProfiles Formin homology-2 (FH2) domain profile. 544 853 IPR015425 -
Pvu11g1472 853 PANTHER FORMIN-LIKE PROTEIN 1 467 - -
Pvu11g1472 853 PANTHER FORMIN-LIKE PROTEIN 468 851 - -
Pvu11g1472 853 SUPERFAMILY Formin homology 2 domain (FH2 domain) 614 836 - -
Pvu11g1472 853 MobiDBLite consensus disorder prediction 356 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1472 Pvu-Chr11 33995128 34003073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1472 527 850 FH2 protein (formin) Gene Family AT5G54650 69.018 1.24e-138 432
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1472 - - pvu:PHAVU_011G141900g 672.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1472 11 33995128 34003073 Pvu11g1472 11 33995128 34003073 ECH
Pvu5g0937 5 26025336 26031230 Pvu11g1472 11 33995128 34003073 PCT