Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1457 ATGGCTTCCAACAAACGCAGCTCTTCATCACACGCTCAGAAATTTGATGTGTTTGTTAGCTTTAGAGGTGCAGATACTCGTAACGGTTTCACAAATCATCTTTTTGCAGCCCTTCAGAGAAAAGGAGTTGTTGCCTTCAAAGATGACCAAACAATCGAGAAAGGGGACTTCTTGGAGCCTGAGCTCTTGTACGCAATTGAAGGATCACAAGTTTTCATTGTTGTCTTCTCAAAGGACTATGCTTCATCCACATGGTGCATGAAAGAGCTTACGAAGATTGTTGAATGGGTTGAAGAAACGGGTCGAAGCTTGCTCCCTATTTTCTATGATGTCACTCCTTCTGAGGTCCGAAAACAGACCGGGGAGTTCGCAAAAGCTTTTGATGAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGGTAAAAAAATGGAGGGCAGCTCTCAAAACATGTAGTGATCGTTGTGGGTGGGATGTTCAAAATAAGCAACAATATGAAGAAATTGAAAACGTTGTTGAAAAGGTAATCCACATATTGGGTCGAAATCAAATTTGGAGTTTCGGAGATGATTTAGTTGATATGCATTCTCGTGTTAAACAATTGGAAGAACTTCTTGATTTGAGTGTAAGTGATAATGTTCGACTTGTGGGAATTTGTGGGATGGGTGGAATAGGAAAGACGACGCTTGTAACTGCATTGTTTAATAAAATCTCTCATCAATATAATGGTTGTTGTTACATTGATGATTTAAGCAAAATTTGTTTGGATCTTGGAGCAACATCTGCACAGAAACAACTTCTTTGTCAAGTTCTAAATCAAGGAAATATTGAGATACACCATATTTCTTATGGAACTATGTTGTTGAAAACTAGGCTACGTCACTTAAAGACGCTTGTTGTTCTTGACAATGTTGATAAAGTGGAACAATTAGAGAAATTGGGTTTGCATCCTGAATATCTAGGTGCAGGGAGTAGAATCATCATAATTTCTAGAGATTGTCGTATCTTACAAAATTACAGAGTAAATGAAGTTTACAATGTTCAATTTTTGGATGACACTCAAGCTCTTCAATTACTTTGTAAAAAAGCTTTCAAATCTATCGATATCAAGTTAGAATATAAAGAGTTGGCATTTGATGTTCTGAAGTATGTGAAAGGTCTTCCATTAGCAATTAAAGTATTGGGCTCATTTTTACTTGATCGAGATGTTTCTGAGTGGAGAAGTGCATTGACTAGAATGAAAGAAAATCCAAACAAAGATATCATGAATGTGTTGCGAATAAGTTTTGATGGATTGGAGAATCTAGAGAAAGAAATATTTTTAGATATTGCTTGTTTCTTATCCAGTTATTATTTCTTTGGGGAGTCAAAAGTGAATAAGCATCTAGAATATCGACAATTTTATCCTGACATTGGTATGAAAGTTCTCATTGAGAAATCACTTATAAGTCGTCGAGGAGGGGAGATTGAAATGCATGACTTGTTGAAAGAGTTGGGTAAGAGTGTTGTCCGAGAAAAAGCCCTCAATGAACCAGGAAAGTGGAGTAGGTTATGGAGTTACAATGATTTCCAAAAAGTCATGAAACTAAATAAGGAAGCCAGAAATGTTGAAGCTATAGTTATTGACAAAGACAAAGAAGAGTTTCTCCAAGAAAGAATAAGAGTGGATGCTCTCTCAAAAATGAATCACCTAGAGTTGCTCATTCTTCAAAATGTGAACTGTTTTGGAACTCTCAATTATATTTCCAATGAACTGAGATATCTATTTTGGAATCACTTTCCTTTCATGTCTTTGCCACCAACTTTCCATCCAGATCAACTTGTAGAACTAATGCTGCCGGATAGCCATATCAAACAATTGTGGGAAGGAAAAAAGTGTCTGCCTAATTTGAGATGGCTGGATCTGAGTCACTCAAAAAATCTTATTGAGGTGCCAGACTTAACTGAGGTTCCACGTCTTACGATTCTCAATCTTGAAGGATGTATAGAAATTGTTGAGATTCATCCATCCATTGCTGTTCTAAGAGAACTTTGTCATTTGAATTTGGGAAATTGTAAAAAACTTGTCCTTAATCTGAATGTCATATCTGGGCTCAGTTCTCTTAATTGCTTAAGTATCTCTGGTTGTTCAAAATTACTAAATAGTAAGATGTTAATGGACCCAAGGCACACAAAATATCTGGAGAAAGTTGATAAAAATACAAATGTGATCCAATTGCCAACATCCTCTGTATACAAACTTCTAATGTTGCCTTTCCAATTTTTCTCCCAACCAAAACCTCAAGATTCATTTGGTTTGTTATTGTCTTCTTTGTCTTGTGTCCCATGTTTGTCGTATCTTGATATAAGCTTCTGCAATCTACTTCAAATCCCAGATGAAATTGGGAACTTGCGTTCTTTAGTAATATTAAATTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATCAATCAACTTTCCAATCTTAAAAATTTGAGATTGGAACACTGCAAGGAACTGAAATATTTGCCTGAGCTTCCGACAATAAAAGGATACATAATTGACAGCATGTACAGTGGATTATTCATTTTTGATTGCCCCAAGTTGAGTGATACGGAACACTGTTATGGCATACTTTTTTCTTGGATCATGCAAAATCTTGAGGTTTACTTACAGCCTCCTATTTTCTCATATGAGATACGTGAGATGTTAATTGTTATTCCTGGAACTCAAATTCCAAAGTGGTTCAATAAACAAAATGCAAGTGATTCAATTAGTGTGGATCCATCTGCTGTTATGGATGACCCAAATTGGATAGGTATTGCCATTTGTGTTCTATTTGTCACACATGAAAATCCTATGAATTTGGGTGAAGGATATCATCATTTTGATTTCATTACTATTGCATACGGTGTCAATAATGTCTACCTTTGGCCAAAAGTTTATTCAGAAGTTGATATACTTTCCAAGAAGGATCTGGTGACAGTTGAATTAGATCACTTGTTCACAGTGTTTTACTCTCGAGAAGAATTCATTCGTCTTCTAAGAAGACATCCAAATACCATGCATGATCTTCATGGAGTTGAATTTGGAATTAAGGTTAGTTGTCAAGGTTATCGTGTTGTGGTGAAGAATTGCGGGTATCGTTGGGTATTTAAGGAGGATCGTCAACAATTAAACTTAAACATGTTTTTCGGAGGAAATTCTTCATCTCCAAAGAAATGTGATTAA 3213 0.3607 MASNKRSSSSHAQKFDVFVSFRGADTRNGFTNHLFAALQRKGVVAFKDDQTIEKGDFLEPELLYAIEGSQVFIVVFSKDYASSTWCMKELTKIVEWVEETGRSLLPIFYDVTPSEVRKQTGEFAKAFDEHEERFKDDLEMVKKWRAALKTCSDRCGWDVQNKQQYEEIENVVEKVIHILGRNQIWSFGDDLVDMHSRVKQLEELLDLSVSDNVRLVGICGMGGIGKTTLVTALFNKISHQYNGCCYIDDLSKICLDLGATSAQKQLLCQVLNQGNIEIHHISYGTMLLKTRLRHLKTLVVLDNVDKVEQLEKLGLHPEYLGAGSRIIIISRDCRILQNYRVNEVYNVQFLDDTQALQLLCKKAFKSIDIKLEYKELAFDVLKYVKGLPLAIKVLGSFLLDRDVSEWRSALTRMKENPNKDIMNVLRISFDGLENLEKEIFLDIACFLSSYYFFGESKVNKHLEYRQFYPDIGMKVLIEKSLISRRGGEIEMHDLLKELGKSVVREKALNEPGKWSRLWSYNDFQKVMKLNKEARNVEAIVIDKDKEEFLQERIRVDALSKMNHLELLILQNVNCFGTLNYISNELRYLFWNHFPFMSLPPTFHPDQLVELMLPDSHIKQLWEGKKCLPNLRWLDLSHSKNLIEVPDLTEVPRLTILNLEGCIEIVEIHPSIAVLRELCHLNLGNCKKLVLNLNVISGLSSLNCLSISGCSKLLNSKMLMDPRHTKYLEKVDKNTNVIQLPTSSVYKLLMLPFQFFSQPKPQDSFGLLLSSLSCVPCLSYLDISFCNLLQIPDEIGNLRSLVILNLGGNKFVTLPSTINQLSNLKNLRLEHCKELKYLPELPTIKGYIIDSMYSGLFIFDCPKLSDTEHCYGILFSWIMQNLEVYLQPPIFSYEIREMLIVIPGTQIPKWFNKQNASDSISVDPSAVMDDPNWIGIAICVLFVTHENPMNLGEGYHHFDFITIAYGVNNVYLWPKVYSEVDILSKKDLVTVELDHLFTVFYSREEFIRLLRRHPNTMHDLHGVEFGIKVSCQGYRVVVKNCGYRWVFKEDRQQLNLNMFFGGNSSSPKKCD* 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1457 1070 Gene3D Ribonuclease Inhibitor 733 873 IPR032675 -
Pvu11g1457 1070 Gene3D Ribonuclease Inhibitor 548 732 IPR032675 -
Pvu11g1457 1070 SUPERFAMILY L domain-like 553 864 - -
Pvu11g1457 1070 SMART till_3 14 154 IPR000157 GO:0007165
Pvu11g1457 1070 SUPERFAMILY "Winged helix" DNA-binding domain 420 527 IPR036390 -
Pvu11g1457 1070 PRINTS Disease resistance protein signature 215 230 - -
Pvu11g1457 1070 PRINTS Disease resistance protein signature 291 305 - -
Pvu11g1457 1070 PRINTS Disease resistance protein signature 384 398 - -
Pvu11g1457 1070 PRINTS Disease resistance protein signature 625 641 - -
Pvu11g1457 1070 ProSiteProfiles TIR domain profile. 13 175 IPR000157 GO:0007165
Pvu11g1457 1070 Pfam C-JID domain 901 1050 IPR045344 -
Pvu11g1457 1070 Gene3D - 349 433 IPR042197 -
Pvu11g1457 1070 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 443 IPR027417 -
Pvu11g1457 1070 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pvu11g1457 1070 Pfam TIR domain 14 162 IPR000157 GO:0007165
Pvu11g1457 1070 Gene3D - 180 345 IPR027417 -
Pvu11g1457 1070 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 188 1052 - -
Pvu11g1457 1070 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 188 1052 IPR044974 GO:0006952
Pvu11g1457 1070 Pfam NB-ARC domain 207 419 IPR002182 GO:0043531
Pvu11g1457 1070 Gene3D - 11 179 IPR035897 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1457 Pvu-Chr11 33577645 33581390 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1457 10 826 WRKY Transcription Factor Family AT4G12020 29.489 3.07e-80 286
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1457 - - vra:106780706 1515.36