Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1456 ATGGCTTCCAACAAAATTCAACGCAGCTCTTCATCACACACTCAGAATTTTGATGTGTTTGTTAGCTTTAGAGGTGCAGATACTCGTAACGGTTTCACAAATCATCTTTTTGCAGCCCTTCAAAGAAAAGGAGTTGTTGTCTTCAAAGATGACCAAACAATCGAGAAAGGGGACTTCTTGGAGTCGGAGCTCTTGTACGCAATTGAAGGATCACAAGTTTTTATTGTTGTCTTCTCAAAGGACTATGCATCATCCACATGGTGCATGAAAGAGCTTACAAAGATTGTTGAATGGGTTGAAGAAACGGGTCGAAGCTTGCTCCCTATTTTCTATGATGTCACTCCTTCTGAGGTCCGAAAACAGACTGGGGAGTTTGCAAAAGCTTTTGATGAACACGAAGAAAGGTTCAAAGATGACTTGGAAATGGTAAAAAAATGGAGGGCAACTCTCAGAACATGTAGCGATCGTTGTGGGTGGGATGTTCAAAATAAGCAACAATACGAAGAAATTGAAAACGTCGTTGAAAAGGTAATCCACATATTGGGTCGAAATCAAATTTGGAGTTTTGAAGATGATTTAGTTGATATGCATTCTCGTGTTAAACAAGTGGAAGAACTTCTAGATTTGAGTGTAAGTGATAGTGTTCGACTTGTGGGAATATGTGGGATGGGTGGAATAGGAAAGACGACACTTGCAACTTCATTGTTTAATAAAATCTCTCATCAATATAATGCTTGTTGTTACATTGATGATTTAAGCAAAATTTATTTTGATCTTGGAGCATCATCTGCACAAAAACAACTTCTTTGTCAAGTTCTAAATCAAGGAAATATTGAGATACACTATGTTTCCCATGGAACTATGTTGATGAAAACTAGGCTACGTCACTTAAAGACGCTTGTTGTTCTTGATAATGTTGATAAAGTTGAACAGTTAGAGAAATTGGGTTTGCATCCTGAATATCTAGATTGTCATATCTTAGAAAATTTCAGAGTAAATGAAGTTTACAATGTTCAACTCTTGGAAGACACTCAAGCTCTTCAATTACTTTGTAAAAAAGCTTTCAAATCTAATGATATCAAAGTAGAATATAAAGAGTTGGCATTTGATGTTCTGAAGTATGTGAAAGGTCTTCCATTAGCAATTAAAGTATTGGGCTCATTTTTACTTGATCGAGATGTTTCTGAATGGAGAGGTGCATTGACTAGAATGAAAGAAAATCCAAGCAAAGATATCATGAATGTGTTGCGAATAAGTTTTAACGGATTGGAGAATCTAGAGAAAGAAATATTTTTAGATATTGCTTGTTTCGTATCAAGTCAATATTTCTTTTGGGAGTCAGAAGTGAATAAATATCTAGGCTATCGACAATTTTATCCCGATATCGGTATGAAAGTTTTGATTGAGAAATCACTTATAATTTGCCAAGGAGGGGAAATTAAAATGCACGACTTGTTGAAAGAGTTGGGTAAGAGTGTTGTCCGAGAAAAAGAACCCAAGGAACCAAGAAAGTGGAGTAGGTTATGGAGCTACAAGGATTTTCGAAAAGTCATGAAAATAAATAAGGAAGCCAAAGATGTTGAAGCTATAGTTATTGACGTAGATCAAAAAGAGTTTCTCCAAGGAAGAATAAAAGTGGATGCTCTCTCAAAAATGAATCACCTAGAGTTGCTCATTCTTCAAAATGTGAATTGCTTTGGAACTCTCAATTATATTTCTAATGAACTAAGATATCTATTTTGGAATCAATTTCCTTTCATGTCTTTACCACCAATTTTTCATCCAGATCAACTTGTAGAATTAATGCTGCCAGATAGCAATATCAAGCAATTGTGGGAAGGAAAAAAGTGTCTGCCTAATTTGAGAACGCTGGATCTGAGTCACTCAAAAAATCTTATTGAGACGCCAGATTTAACTGAGGTTCCAAGTCTTACGATTCTGAATCTTGAAGGATGTATAGAAATTGTGCAGATTCATCCATCCATTGGTATTCTAAGAGAACTTTGTCATTTGAATTTGAGAAATTGCAAAAAACTTGTCCTTAATCCAAATGTCATATCTGGGCTCAGTTCTCTTAAATTCTTAACTCTCTCTGGCTGTTCAAAATTAGTAAATAGTAAGATGTTAATGGACCCAAGGCACACAGAATATGTGGAGAAAGTTGATAAAAATACAAATGTCATCCAATTGCCAACATCCTCTGTATACAAACTTCTAATGTTGCCTTTCCAATTTTTCTCCCAACCAAAACCTCAAGATTCACTTGGTTTCTTATTGTCTTCTTTGTCTTGTATCCCATGTTTGTCGTATCTTGATATAAGCTTCTGCAATCTACTTCAAATCCCAGATGAAATTGGGAACTTGCGTTCTTTAATAAGATTAAATTTGGGGGGAAACAAATTTGTGACACTACCAAGCACCATCAAGCAACTTTCCAATCTTGAACATTTGAACTTGGAACACTGCAAGCAGCTGAAATATTTGCCCGAGCTTCCTACAATAAAAGAAAAAAGAATTGACAGATACCACTGTGGATTATACATTTTTGATTGCTCCAAGTTGAGTGATATGGAACACTGCTATAGCATAGTTTTTTCTTGGATGATGCAAAATCTTGAGGTTTCCTTAATGCCTCCTATTTCCTCAAATAACATGTCAATTGTTATTCCTGGAACTCAAATTCCAAAGTGGTTCAATAATCAAAGTGCAAGTGCGTCAATTAGTGTGGACCCATCTGCTGTTATAGATGACCCAAATTGGATAGGTGTTGCCACTTGTGTTCTATTTGTCACACATGAAGATCCTATGAATTTGGGTGAAGAATATCATAATTATCGTTTGCATACTAGTATTGTATTCGGTGTCAATAATGTTTACCTTTGGCCAAAAACTTATTCAGTAGTTCCAATACATTTCATGAAGGATCTGGTGACAGTTGAATTAGATCACTTGTTGACAGTGTTTTACTCACGAGAAGAATTCATTCATCTTCTAAGCAGATATCCAAATACCATGCATGATCTTCATGGAGTTCAATTTGAAACTAATGTTAAAAGTCGTCAAGGTTTACGTGTTGTGGTGAAGAATTGCGGGTATCGTTGGGTATTTAAGGAGGATCTTCAACAATTAAATTCAAACATGTTTTTCGGAGGAAATTCTTCATCTCCAAAGAGAAGACTCCTAATAAGTGATTAA 3195 0.3559 MASNKIQRSSSSHTQNFDVFVSFRGADTRNGFTNHLFAALQRKGVVVFKDDQTIEKGDFLESELLYAIEGSQVFIVVFSKDYASSTWCMKELTKIVEWVEETGRSLLPIFYDVTPSEVRKQTGEFAKAFDEHEERFKDDLEMVKKWRATLRTCSDRCGWDVQNKQQYEEIENVVEKVIHILGRNQIWSFEDDLVDMHSRVKQVEELLDLSVSDSVRLVGICGMGGIGKTTLATSLFNKISHQYNACCYIDDLSKIYFDLGASSAQKQLLCQVLNQGNIEIHYVSHGTMLMKTRLRHLKTLVVLDNVDKVEQLEKLGLHPEYLDCHILENFRVNEVYNVQLLEDTQALQLLCKKAFKSNDIKVEYKELAFDVLKYVKGLPLAIKVLGSFLLDRDVSEWRGALTRMKENPSKDIMNVLRISFNGLENLEKEIFLDIACFVSSQYFFWESEVNKYLGYRQFYPDIGMKVLIEKSLIICQGGEIKMHDLLKELGKSVVREKEPKEPRKWSRLWSYKDFRKVMKINKEAKDVEAIVIDVDQKEFLQGRIKVDALSKMNHLELLILQNVNCFGTLNYISNELRYLFWNQFPFMSLPPIFHPDQLVELMLPDSNIKQLWEGKKCLPNLRTLDLSHSKNLIETPDLTEVPSLTILNLEGCIEIVQIHPSIGILRELCHLNLRNCKKLVLNPNVISGLSSLKFLTLSGCSKLVNSKMLMDPRHTEYVEKVDKNTNVIQLPTSSVYKLLMLPFQFFSQPKPQDSLGFLLSSLSCIPCLSYLDISFCNLLQIPDEIGNLRSLIRLNLGGNKFVTLPSTIKQLSNLEHLNLEHCKQLKYLPELPTIKEKRIDRYHCGLYIFDCSKLSDMEHCYSIVFSWMMQNLEVSLMPPISSNNMSIVIPGTQIPKWFNNQSASASISVDPSAVIDDPNWIGVATCVLFVTHEDPMNLGEEYHNYRLHTSIVFGVNNVYLWPKTYSVVPIHFMKDLVTVELDHLLTVFYSREEFIHLLSRYPNTMHDLHGVQFETNVKSRQGLRVVVKNCGYRWVFKEDLQQLNSNMFFGGNSSSPKRRLLISD* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1456 1064 ProSiteProfiles TIR domain profile. 15 177 IPR000157 GO:0007165
Pvu11g1456 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 159 IPR035897 -
Pvu11g1456 1064 PRINTS Disease resistance protein signature 217 232 - -
Pvu11g1456 1064 PRINTS Disease resistance protein signature 293 307 - -
Pvu11g1456 1064 PRINTS Disease resistance protein signature 375 389 - -
Pvu11g1456 1064 PRINTS Disease resistance protein signature 616 632 - -
Pvu11g1456 1064 Pfam Leucine rich repeat 768 823 IPR001611 GO:0005515
Pvu11g1456 1064 SMART till_3 16 156 IPR000157 GO:0007165
Pvu11g1456 1064 Gene3D Ribonuclease Inhibitor 723 884 IPR032675 -
Pvu11g1456 1064 Gene3D Ribonuclease Inhibitor 531 722 IPR032675 -
Pvu11g1456 1064 Pfam TIR domain 16 164 IPR000157 GO:0007165
Pvu11g1456 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 181 434 IPR027417 -
Pvu11g1456 1064 Pfam NB-ARC domain 201 410 IPR002182 GO:0043531
Pvu11g1456 1064 SUPERFAMILY "Winged helix" DNA-binding domain 411 518 IPR036390 -
Pvu11g1456 1064 Pfam Leucine Rich Repeat 597 616 IPR011713 -
Pvu11g1456 1064 SUPERFAMILY L domain-like 543 850 - -
Pvu11g1456 1064 Gene3D - 340 424 IPR042197 -
Pvu11g1456 1064 Gene3D - 180 336 IPR027417 -
Pvu11g1456 1064 Gene3D - 9 179 IPR035897 -
Pvu11g1456 1064 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 190 1045 - -
Pvu11g1456 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 190 1045 IPR044974 GO:0006952
Pvu11g1456 1064 Pfam C-JID domain 889 1040 IPR045344 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1456 Pvu-Chr11 33485955 33494837 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1456 12 817 WRKY Transcription Factor Family AT4G12020 29.489 2.74e-72 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1456 - - vra:106780706 1521.91