Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1440 ATGTCTGAATTAGACGCTCAAATTCCTACTGCCTTCGATCCTTTTGCTGAGGCAAATGCTGATGACTCGGGTGCTGGGTCAAAGGAGTATGTGCATATTCGTGTACAACAGAGAAATGGTAGGAAAAGCCTGACAACTGTTCAGGGATTGAAAAAAGAATTCAGCTATAACAAGATACTTAAAGACGTTAAGAAAGAGTTCTGTTGCAATGGCACAGTTGTTCAGGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAGCGGAAGAATGTTTCTGCCTTCCTAGTCCAGGCTGGTATCGTGAAGAAGGAGCATATCAAGATTCATGGTTTCTAA 342 0.424 MSELDAQIPTAFDPFAEANADDSGAGSKEYVHIRVQQRNGRKSLTTVQGLKKEFSYNKILKDVKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSAFLVQAGIVKKEHIKIHGF* 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1440 113 MobiDBLite consensus disorder prediction 1 24 - -
Pvu11g1440 113 PIRSF Transl_init_SUI1_Euk 1 113 IPR005874 GO:0003743
Pvu11g1440 113 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 1 113 - -
Pvu11g1440 113 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
Pvu11g1440 113 CDD eIF1_SUI1 29 112 IPR005874 GO:0003743
Pvu11g1440 113 SUPERFAMILY eIF1-like 4 113 IPR036877 GO:0003743|GO:0006413
Pvu11g1440 113 Gene3D - 2 113 - -
Pvu11g1440 113 Pfam Translation initiation factor SUI1 28 102 IPR001950 GO:0003743|GO:0006413
Pvu11g1440 113 TIGRFAM SUI1_MOF2: translation initiation factor SUI1 6 113 IPR005874 GO:0003743
Pvu11g1440 113 PANTHER PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG ISOFORM X1 1 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1440 Pvu-Chr11 33083553 33086519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1440 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 88.496 1.67e-74 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1440 K03113 - gmx:100306129 223.402