Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1410 GTGTTGCGAGTAAGTTATGATGGATTGGAGCATCAAGAGAAAGAAATATTTTTAGATATTGCTTGTTTCTTATCCACTACTAGTCATCACTATCTTTTTAAGTGGGAAGTGGAAGTGAAAAAACTTCTAGACTACCGACAAGTTTATCCTAACATTGGTATGAAAGTTCTGATTGAGAAGTCACTTATAAGTTATCGAGAAGGTATTATTGAAATGCACAACTTGTTGAAAGAGTTGGGTAAGAGTATTGTCCGAGAAAAAGCACCCAAGGAACCAAGAAAGTGGAGTAGGTTGTGGAGCTTCAAGGATCTCCAAAAAGTCATGGAAATAAATAAGGAAGCCAAAAATGTTGAAGCCATAGTTATTGAACAGCACCAAGAAGAGTTCCTTCAAAGAAGAATAAAAGTGGATGCTCTCTCAAAAATGAATCGCCTTGAATTGCTCATTCTTCACAACGTGAACTGTTTTGGGACTCTCAATTACATTTCTAGTGAACTGAGATACCTATTCTGGGATTACTTTCCTTTCATGTCTTTGCCATCAACTTTCCATCTAGATCAACTTGTGGAATTGATCCTGCATCATAGCAATATCAAGCGATTATGGGTTGGCAAAAAGTGTTTGCCTAATTTGAGAACGCTTGATCTCTGTCACTCCAAAAATCTTATTGAGGTTCCAGACTTAAGTGAGGTTCCACGTCTTACGGATCTCATTCTGGAAGGATGTACAGAAATTATCCAGATTGATCAGTCAATTGGATTTCTAAGAGAACTTCAGTATTTGAATTTGAAAAATTGTAAGAAACTTTTCCTTAATCTGAATGTCATATTTGGGCTCAGTTCTCTTCGTAGCTTGATTCTCTCTGGCTGTTCAAAATTACTAAACAGTAAGATGTTAATGGACCAAAGGCACACAGAACATTTGGAGAATGTTGATAAAAATACAAATGTCATCCAATTGCCTTTATACAAACTTCTAATGTTTCCTTTCCACTTTTTCTCCCCTCCAAAACCTGAAGATTCACTTGGTTTGTTATTGTCTTCTTTGTCTTGTATCCCATGTTTGTTCGATCTTGATATAAGCTTCTGCAATCTACATCAAATCCCAGATGAAATTGGGAACTTACGTTCTTTAGAATATTTAAATTTGGGGGGAAACGAATTTGTGACACTACCAAGCACCATCAAGGAACTTTCCAATCTTCAAAGTTTGAACTTGGAACACTGCAAGCAGCTGAAATATTTGCCCGAGCTTCCGACAATAAAAGAAAAAACAAAGGTCGGATACTACGGGGGATTATACATTTTTTATTGCCCCAAGTTGAGTGAAATGGAAAAGTGTTATAGCATGGTTTTTTCTTGGATGATGCAAAATCTTGAGGTTTACTTGCAACCTACTATTTCCTCAGCTCGGATGACAATTGTTATTCCTGGAACTCACATTCCAAAGTGGTTCGATAAACAAAATGCAAGTACATCAATAAATATGGACCCGTCTACTGTTCTAGATGACCCAAATTGGATAGGTGTTGCCATTTGTGTTCTATTTGTCACACACAAAGATCCTATGAATTTGGGTGGAAGATATCAAGATTCTTTCTACCCTACTATTGTATGCGGTGTCAGTAATGTCCACCATTCGACAAGATATCATTTTATGGTTCCAATACATTTCGGGGAAGATCTGGTAACACTCGAATTAGATCACTTGTTGACAGTGTTTTACTCTAGAGAAGAATTCATTCATCTTCTAAGCAGATATCCAAATACCATGCATGGAATTCAATTTGAAACCGTTGTTCAAAGTCCTCAAGGTTTACGTGTTGTGGTGAAGAATTGCGGGTATCGTTGGGTATTTAAAGAAGATCTTCAACAATTAAACTCAAACATGTTTTTCAGCGGAAATTCTTCATCTCGAAAGAGGAAACTCCTAATAAGTAATTAA 1944 0.3663 VLRVSYDGLEHQEKEIFLDIACFLSTTSHHYLFKWEVEVKKLLDYRQVYPNIGMKVLIEKSLISYREGIIEMHNLLKELGKSIVREKAPKEPRKWSRLWSFKDLQKVMEINKEAKNVEAIVIEQHQEEFLQRRIKVDALSKMNRLELLILHNVNCFGTLNYISSELRYLFWDYFPFMSLPSTFHLDQLVELILHHSNIKRLWVGKKCLPNLRTLDLCHSKNLIEVPDLSEVPRLTDLILEGCTEIIQIDQSIGFLRELQYLNLKNCKKLFLNLNVIFGLSSLRSLILSGCSKLLNSKMLMDQRHTEHLENVDKNTNVIQLPLYKLLMFPFHFFSPPKPEDSLGLLLSSLSCIPCLFDLDISFCNLHQIPDEIGNLRSLEYLNLGGNEFVTLPSTIKELSNLQSLNLEHCKQLKYLPELPTIKEKTKVGYYGGLYIFYCPKLSEMEKCYSMVFSWMMQNLEVYLQPTISSARMTIVIPGTHIPKWFDKQNASTSINMDPSTVLDDPNWIGVAICVLFVTHKDPMNLGGRYQDSFYPTIVCGVSNVHHSTRYHFMVPIHFGEDLVTLELDHLLTVFYSREEFIHLLSRYPNTMHGIQFETVVQSPQGLRVVVKNCGYRWVFKEDLQQLNSNMFFSGNSSSRKRKLLISN* 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1410 647 Pfam Leucine rich repeat 358 410 IPR001611 GO:0005515
Pvu11g1410 647 SUPERFAMILY L domain-like 133 438 - -
Pvu11g1410 647 Pfam C-JID domain 476 623 IPR045344 -
Pvu11g1410 647 Gene3D Ribonuclease Inhibitor 125 299 IPR032675 -
Pvu11g1410 647 Gene3D Ribonuclease Inhibitor 339 458 IPR032675 -
Pvu11g1410 647 SUPERFAMILY "Winged helix" DNA-binding domain 1 108 IPR036390 -
Pvu11g1410 647 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 1 420 IPR044974 GO:0006952
Pvu11g1410 647 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 462 630 IPR044974 GO:0006952
Pvu11g1410 647 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 462 630 - -
Pvu11g1410 647 PANTHER REPEAT-CONTAINING PROTEIN, PUTATIVE-RELATED 1 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1410 Pvu-Chr11 31216094 31220206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1410 8 417 WRKY Transcription Factor Family AT4G12020 30.374 3.71e-37 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1410 - - pvu:PHAVU_011G1362001 1287.32