Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1382 ATGGGGTTTCGTTTACGTGGTATCCGAAAGGCATTATTTGCAACAAATCAAGCATCTTCAAAAGCAGGGGATGTGCCAAAGGGCTATCTTGCAGTCTATGTAGGAGAGAAAATGAAGCGGTTTGTAGTCCCCTTATCATACTTGAATCAACCTTCATTTCAGAACTTGTTGAATCAAGCTGTTGAAGAGTTCGGATATGAAGATCCCATTATTTGTGGCCTGTCAACTCCTTGCAGTGAAGATGTCTTCCGACGTATAACGTGTTGCTTCAATTGA 276 0.4167 MGFRLRGIRKALFATNQASSKAGDVPKGYLAVYVGEKMKRFVVPLSYLNQPSFQNLLNQAVEEFGYEDPIICGLSTPCSEDVFRRITCCFN* 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1382 91 Pfam Auxin responsive protein 16 89 IPR003676 GO:0009733
Pvu11g1382 91 PANTHER AUXIN-INDUCED PROTEIN 6B 1 91 - -
Pvu11g1382 91 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1382 Pvu-Chr11 30570672 30571402 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1382 15 90 Calmodulin-binding Proteins AT5G20810 42.105 4.06e-15 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1382 K14488 - gmx:100820621 137.887