Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1365 ATGGGTTTCCGATTACCTGCTATTCGACGAGCATCATTCACAGCTAGCCAAGCAGCTTCAAAATCTTCAGAAGTCCCAAAGGGCTATCTTGCAGTGTATGTTGGAGAGAAACAAAAGCGGTTTATGATTCCCATATCATACTTGAACCAACCTTCATTTCAAGGCTTGTTGAGTCAGGCTGAAGATGAATTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCACCGAAGACGTCTTCCAACGTATAACTTCTTTCATCAATTGA 273 0.4286 MGFRLPAIRRASFTASQAASKSSEVPKGYLAVYVGEKQKRFMIPISYLNQPSFQGLLSQAEDEFGYDHPMGGLTIPCTEDVFQRITSFIN* 91
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1365 90 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Pvu11g1365 90 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Pvu11g1365 90 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1365 Pvu-Chr11 29703476 29703973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1365 14 89 Calmodulin-binding Proteins AT3G43120 46.053 5.63e-19 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1365 K14488 - gmx:106798972 161.384
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1365 11 29703476 29703973 Pvu11g1365 11 29703476 29703973 ECH