Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1364 ATGAGGCTACCAGGATCAATACAAATCATTCACATCCGAAAGCATTCAAAGTTCTCAAGACTTATCCTAAATCCATTATCTTCTGAAATCAATACAACAATGGGTTTTCGTTTACCTGTTATCAGAAAGGCCTTATATGCAGCAAATCAAGCATCTTCTAAAGCAGTGGATACACAAAAGGACCATCTTGCAGTCTATGTTGGAGAGGAAATGAAACGGTTTGTGATCCCCGTAGCATACTTGAACCAACCTTCGTTCCAGGAGTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCTTGCAGCGAAGATGTCTTCCAACGTATAACTTCATGCTTCAATTGA 372 0.4059 MRLPGSIQIIHIRKHSKFSRLILNPLSSEINTTMGFRLPVIRKALYAANQASSKAVDTQKDHLAVYVGEEMKRFVIPVAYLNQPSFQELLSQAEEEFGYDHPMGGLTIPCSEDVFQRITSCFN* 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1364 123 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 34 123 IPR003676 GO:0009733
Pvu11g1364 123 PANTHER AUXIN-INDUCED PROTEIN 6B 34 123 - -
Pvu11g1364 123 Pfam Auxin responsive protein 48 121 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1364 Pvu-Chr11 29674124 29675180 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1364 50 122 Calmodulin-binding Proteins AT5G20810 46.575 1.37e-17 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1364 K14488 - gmx:100820621 157.918
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1364 11 29674124 29675180 Pvu11g1364 11 29674124 29675180 ECH