Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1352 ATGCGACCACCGCGGAAGACGGTGAATTTCCGCCACGGCGACAAGGTGGAGGTGTGCATCAACGAGGAGGGCTTCCTCGGCTCCTACTACCTCGCCACGGTTGTGTCGCGCCTCGACAACGGCCTCTACATCGTCCGCTACGACACGCTGCTCGAGGACGACGAGTCTCAGCCCCTGACCGAGACCCTCTTCCCCAAAGAGCTCCGCCCCAAGCCTCCGCGCCTAACCGCTACCTCCTCCTTCGCCCTCTACCAACGCGTCGACGCCTTCGACAACGACGGGTGGTGGGTTGGCGAGATCTCCGGCAAGGTCGACAACCGCCATTACTATGTTTATTTCTCCACCACTCACGAGGAGATCGTGTACCCCGCCTCCGCAATTAGGGTTCACCAGGAGTGGCTCAACGGCCAATGGATTCGCTCCAATTGA 429 0.6084 MRPPRKTVNFRHGDKVEVCINEEGFLGSYYLATVVSRLDNGLYIVRYDTLLEDDESQPLTETLFPKELRPKPPRLTATSSFALYQRVDAFDNDGWWVGEISGKVDNRHYYVYFSTTHEEIVYPASAIRVHQEWLNGQWIRSN* 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1352 142 SMART agenet_At_2 8 76 IPR014002 -
Pvu11g1352 142 SMART agenet_At_2 79 135 IPR014002 -
Pvu11g1352 142 Pfam Agenet domain 13 73 IPR008395 -
Pvu11g1352 142 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 141 - -
Pvu11g1352 142 Gene3D - 1 81 - -
Pvu11g1352 142 PANTHER - 7 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1352 Pvu-Chr11 29488035 29489083 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1352 22 133 PHD Transcription Factor Family AT5G58610 33.333 1.77e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1352 - - gmx:121175082 226.483