Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1334 ATGGAGGATGGTGAGAAACCCACAGGTAATTCCTATGGCATTTATGATATGGATGTTGTTGATGCTGCTTTGCATGTCCAACATCAACTACATGATCAAGTAATGGTCGAACAGGGTGATGATAACAAAAATGGGGATTCTGACCCTAGTAATGTGCCAGAGACCAATATTATTAACCGTTCGCACCATGAACTGATCACTCCTAAGCCTAAAGAAAAGAACATTAGAGAAATGAAGAATGTGCTAAATGATATTGAGATGACTGAGTATGATGAGTATGGCACACCTTTGGACCGAGAAACATTTATGAAAGAGATTGAGAATTTGTACAGAGAGTGGTCCTTGGAATTTAAGCCTCCTAAGTTTTATGGAGAGCCACTATATTGCGAAGTCACATTATACCTATATTCTAGCTTTGGATGTGCTCATTGA 432 0.3889 MEDGEKPTGNSYGIYDMDVVDAALHVQHQLHDQVMVEQGDDNKNGDSDPSNVPETNIINRSHHELITPKPKEKNIREMKNVLNDIEMTEYDEYGTPLDRETFMKEIENLYREWSLEFKPPKFYGEPLYCEVTLYLYSSFGCAH* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1334 143 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN ARID DOMAIN- CONTAINING PROTEIN DEAD RINGER PROTEIN B-CELL REGULATOR OF IGH TRANSCRIPTION BRIGHT 38 129 IPR045147 GO:0006357
Pvu11g1334 143 PANTHER AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 5 38 129 - -
Pvu11g1334 143 MobiDBLite consensus disorder prediction 45 62 - -
Pvu11g1334 143 MobiDBLite consensus disorder prediction 38 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1334 Pvu-Chr11 28511604 28512184 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1334 16 129 ARID Transcription Factor Family AT1G76510 35.156 5.45e-15 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1334 - - pvu:PHAVU_011G128900g 305.834