Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1325 ATGGCCTCCTTGCCCATGGGGCACCACCACCAACCGCCGCCGCCGGCGTTGCCTTTGCAGCCCTCACAAACGCAGCAGTCTCACCCGCAACCCGAAGTGCCACGCCGGAGCTCCGATATGGAGACCGATAAGGATATGTCAGCCACTGTCATTGAGGGGAATGATGCGGTCACAGGCCACATAATCTCCACCACTATTGGAGGCAAAAATGGGGAACCTAAACAAACCATCAGTTACATGGCAGAACGTGTTGTTGGCACTGGATCGTTTGGAGTTGTTTTCCAGGCAAAGTGCTTGGAGACTGGAGAGCCAGTGGCTATTAAAAAGGTCTTGCAAGACAGGCAATACAAAAATCGTGAATTGCAGTTAATGCGCTTAATGGATCATCCAAATGTAATTTCCCTGAAGCACTGTTTCTTCTCCACAACAAGCAGAGATGAACTTTTTCTAAACTTAGTAATGGAATATGTACCTGAGACAATGTACCGAGTTATAAAGCACTACAATACTATGAACCAGAGGATGCCTCTCATCTTTGCAAAACTGTACACATATCAAATCTTTAGGGGATTAGCATATATCCATACCACACTGGGAGTTTGCCATAGGGACGTGAAGCCTCAAAATCTTTTGGTTCACCCACTTACTCACCAAGTTAAGCTTTGTGATTTTGGGAGCGCCAAAGTTCTGGTCAAGGGTGAATCAAACATTTCATACATATGTTCACGTTACTATCGGGCTCCAGAACTAATATTTGGTGCCACAGAATACACAGCTTCTATTGATATCTGGTCAGCTGGTTGTGTTCTTGCTGAACTTCTTCTAGGACAGCCACTATTTCCTGGAGAAAATCAGGTGGATCAACTTGTGGAAATTATTAAGGTTCTTGGTACCCCAACACGAGAGGAAATTCGTTGCATGAACCCAGAATATACAGATTTTAGATTCCCTCAGATTAAAGCTCATCCTTGGCACAAGGTTTTCCATAAGCGAATGCCTCCGGAAGCAATTGACCTTGCATCAAGGCTTCTCCAATATTCACCTAGTCTCCGATGCACTGCGCTGGAAGCATGTGCACATTCTTTCTTCGACGAGCTTCGCGAGCCAAATGCTCGCCTACCTAATGGCCGTCCATTGCCCCCGCTTTTCAACTTTAAACAGGAATTAGCTGGAGTATCACCTGAACTGGTCAATAGGCTCATCCCAGAGCATATTAGACGGCAGACTGGTCTCAGCTCCCCTCATTCTGCCGGTACATAG 1260 0.4619 MASLPMGHHHQPPPPALPLQPSQTQQSHPQPEVPRRSSDMETDKDMSATVIEGNDAVTGHIISTTIGGKNGEPKQTISYMAERVVGTGSFGVVFQAKCLETGEPVAIKKVLQDRQYKNRELQLMRLMDHPNVISLKHCFFSTTSRDELFLNLVMEYVPETMYRVIKHYNTMNQRMPLIFAKLYTYQIFRGLAYIHTTLGVCHRDVKPQNLLVHPLTHQVKLCDFGSAKVLVKGESNISYICSRYYRAPELIFGATEYTASIDIWSAGCVLAELLLGQPLFPGENQVDQLVEIIKVLGTPTREEIRCMNPEYTDFRFPQIKAHPWHKVFHKRMPPEAIDLASRLLQYSPSLRCTALEACAHSFFDELREPNARLPNGRPLPPLFNFKQELAGVSPELVNRLIPEHIRRQTGLSSPHSAGT* 420
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1325 419 MobiDBLite consensus disorder prediction 1 42 - -
Pvu11g1325 419 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 34 411 - -
Pvu11g1325 419 Gene3D Transferase(Phosphotransferase) domain 1 159 406 - -
Pvu11g1325 419 Gene3D Phosphorylase Kinase; domain 1 64 158 - -
Pvu11g1325 419 PANTHER OS02G0236200 PROTEIN 34 411 - -
Pvu11g1325 419 SUPERFAMILY Protein kinase-like (PK-like) 78 387 IPR011009 -
Pvu11g1325 419 CDD STKc_GSK3 74 366 IPR039192 -
Pvu11g1325 419 Pfam Protein kinase domain 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1325 419 SMART serkin_6 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1325 419 ProSitePatterns Protein kinases ATP-binding region signature. 85 109 IPR017441 GO:0005524
Pvu11g1325 419 ProSitePatterns Serine/Threonine protein kinases active-site signature. 200 212 IPR008271 GO:0004672|GO:0006468
Pvu11g1325 419 ProSiteProfiles Protein kinase domain profile. 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1325 Pvu-Chr11 28309336 28314434 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1325 83 401 MAP Kinase Gene Family AT3G59790 35.329 1.59e-57 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Pvu11g1325 Pkinase 4.1e-63 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1325 K14502 - gmx:100810924 783.097
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g0974 5 28123663 28128632 Pvu11g1325 11 28309336 28314434 PCT