Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1322 ATGATGTCCAGATCGTATACAAATCTTTTAGATTTGGCCTCTGGGAATTTCCCGGCAATGGGGGGCAGGGAGTCTAGGGAGAGGAGGCGAATGCCGAGGGTTATGAGTGTCCCAGGGTTTCTCACTGAGGTAGATGATGATCAGGCAGTTAGTGTTTCCTCTGATAACCCGTCGACAGTTACTACAGATAGAATGATCATTGTGGCTAACCAGTTACCGTTGAAGGCAAAGCGAAGAGAGGACAACAAAGGATGGTCTTTCAGTTGGAATGAAGATTCGTTACTTTTACAGCTTAAGGATGGACTTCCGGATGACATGGAAGTTCTTTATGTTGGTTCCTTACGCGTTGACATTGATCCAGCAGAACAGGATGACGTGTCTCAGAATTTATTGGATAAATTCAAATGTGTTCCGACATTTCTACCCGCTGATGTTTTGGCTAAATTTTATGATGGTTTTTGTAAAAGGCAGTTGTGGCCACTTTTTCATTACATGTTACCATTTTCAACAGACAAAAGCCACCGATTTGATCGTACCATGTGGGAAGCTTATGTGCTAGCAAACAAGCTATTTTTTCAGAAAGTAGTTGAAATAATAAACCCTGAGGATGATTACATATGGATTCATGATTATCATTTGATGGTGTTGCCAACTTTTATAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCCTGCATAGCCCCTTTCCATCATCAGAGATTTACAGGACTCTTCCTGTCAGGGAAGAGATACTGAAAGCTTTACTAAACTCTGATATCATCGGATTCCATACCTTTGACTATGCTCGTCATTTCCTTTCTTGCTGCAGTCGTATGCTGGGTCTGGAGTATCAGTCTAAGAGGGGTTATTTAGGATTGGAGTATTATGGAAGGACAATCAGTATTAAGATTATGCCTGTTGGGATTCACATGGGCCGGATTGATTCAGTCATGAGAATGGCAGTTGAGGAGGCCGAGGTTAAGGAGCTCAAAAGGCAATTTGAAGGAAAAACTATCTTACTCGGTGTTGATGACATGGACATTTTTAAAGGCATAAATTTGAAGATTCTGGCGATGGAGCAGATGCTCAGACAACATCCCAAATGGCAAGGAAGAGCTGTTCTGGTCCAGATAGTTAATCCTGCTAGAGGTAAAGGGATACATCTGGAGGAGATACATGCTGAAATACAAGAAAGCTGCACCCGGATCAACAGAGTGTTTGGGCGGCCTGGTTATGAACCTATTGTTTTTGTTGATAGAGCAGTATCTATTGCTGAAAAAGTTGCCTATTACAGCATTGCAGAGTGTGTTATTGTCACAGCTGTAAGGGATGGAATGAACCTAACTCCTTATGAATACGTTGCTTGTAGACAGGGAATATCTGGTTCTGAATCATGTTCCAATGTCAGTGACCCAAAGAAGAGTATGCTAGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCAATCCGTGTCAATCCATGGAATGTTGAAGCAACTTCAGAGGCAATGAATGAGGCTATCTCAATGAGTGATGGGGAGAAACAGTTGCGGCATGAGAAGCATTACCGGTATGTCAGCACCCATGATGTGGCTTACTGGTCACATAGTTTTTTGCAAGACATGGAGCGGGCTTGCACAGACCTTTTAAGGAAAAGATGTTGGGGAATAGGTCTAAGCTTTGGATTTAGAGTTGTGGCACTTGACCCTAATTTTAAAAAGCTATCGATTGATGCTATGGTTTCAGCTTACAAGAGAGCAAGGAGTAGGGCCATTTTGTTGGATTATGATGGTACTGTGATGCCGCAGAACTCCATTAATAAGAGTCCAAGCAAGGAGGTCTTGTCTATAATGGAATCACTTAGTGCAGACCCCAAAAATATTGTTTTCATTGTTAGTGGAAGGGGAAGAAATAGCTTAAGTGACTGGTTTGCTCCCTGCAAAAAACTTGGAATTGCCGCAGAACATGGGTACTTCTTGAGATGGGGCCACAATGGAGAATGGGAGATTTGTGGTAAGTCCTCCGACTTTGGATGGATGCAGATAGCTGAACCTGTGATGAAACTATATACAGAGGCAACTGATGGTTCCTCAATTGAAAGAAAAGAAAGTGCTTTAGTCTGGCAGTACCGTGATGCAGACCTTGGTTTTGGATCTGCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGTGTTTTGGCTAATGAGCCTGTTGCTGTGAAGAGTGGCCAGTTTATTGTTGAAGTAAAACCACAGGATGTGAGCAAAGGTTTGGTGGCCGAAAGGATATTTTCGTCAATGGAAGGTAAAGGCAACCAGGCTGACTTTGTGCTGTGTGTTGGTGATGACAGATCAGATGAGGACATGTTTGAAATAGTTAGTAGTGCAATCTCAAGGAATATTCTTGCCACCAATGCTTCTGTGTTTGCCTGTACGGTTGGACAAAAGCCAAGCAAAGCAAAGTATTATCTGGACGATACAAGTGAGGTAGCATGCATGCTAGAATCTTTGGCCGAAGAATCAGATTCTTCACCCTGCATAAAAGAAACTGGGGATTCCTCTAGGAGGCAAGTATGA 2589 0.4241 MMSRSYTNLLDLASGNFPAMGGRESRERRRMPRVMSVPGFLTEVDDDQAVSVSSDNPSTVTTDRMIIVANQLPLKAKRREDNKGWSFSWNEDSLLLQLKDGLPDDMEVLYVGSLRVDIDPAEQDDVSQNLLDKFKCVPTFLPADVLAKFYDGFCKRQLWPLFHYMLPFSTDKSHRFDRTMWEAYVLANKLFFQKVVEIINPEDDYIWIHDYHLMVLPTFIRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIHMGRIDSVMRMAVEEAEVKELKRQFEGKTILLGVDDMDIFKGINLKILAMEQMLRQHPKWQGRAVLVQIVNPARGKGIHLEEIHAEIQESCTRINRVFGRPGYEPIVFVDRAVSIAEKVAYYSIAECVIVTAVRDGMNLTPYEYVACRQGISGSESCSNVSDPKKSMLVISEFIGCSPSLSGAIRVNPWNVEATSEAMNEAISMSDGEKQLRHEKHYRYVSTHDVAYWSHSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRARSRAILLDYDGTVMPQNSINKSPSKEVLSIMESLSADPKNIVFIVSGRGRNSLSDWFAPCKKLGIAAEHGYFLRWGHNGEWEICGKSSDFGWMQIAEPVMKLYTEATDGSSIERKESALVWQYRDADLGFGSAQAKEMLDHLESVLANEPVAVKSGQFIVEVKPQDVSKGLVAERIFSSMEGKGNQADFVLCVGDDRSDEDMFEIVSSAISRNILATNASVFACTVGQKPSKAKYYLDDTSEVACMLESLAEESDSSPCIKETGDSSRRQV* 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1322 862 CDD GT20_TPS 64 547 IPR001830 GO:0003824|GO:0005992
Pvu11g1322 862 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 854 IPR001830 GO:0003824|GO:0005992
Pvu11g1322 862 Gene3D Glycogen Phosphorylase B; 318 531 - -
Pvu11g1322 862 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING), TREHALOSE-PHOSPHATASE-RELATED 1 854 - -
Pvu11g1322 862 TIGRFAM T6PP: trehalose-phosphatase 591 842 IPR003337 GO:0003824|GO:0005992
Pvu11g1322 862 MobiDBLite consensus disorder prediction 842 862 - -
Pvu11g1322 862 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 596 800 IPR006379 -
Pvu11g1322 862 Pfam Glycosyltransferase family 20 64 547 IPR001830 GO:0003824|GO:0005992
Pvu11g1322 862 Pfam Trehalose-phosphatase 597 832 IPR003337 GO:0003824|GO:0005992
Pvu11g1322 862 CDD HAD_TPP 595 835 - -
Pvu11g1322 862 Gene3D - 722 852 IPR023214 -
Pvu11g1322 862 Gene3D - 593 694 IPR023214 -
Pvu11g1322 862 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 64 551 - -
Pvu11g1322 862 SUPERFAMILY HAD-like 594 842 IPR036412 -
Pvu11g1322 862 Gene3D Glycogen Phosphorylase B; 57 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1322 Pvu-Chr11 28197445 28202527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1322 1 848 Trehalose Biosynthesis Gene Families AT1G06410 77.948 0.0 1388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1322 K16055 - gmx:100811463 1636.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1322 11 28197445 28202527 Pvu11g1322 11 28197445 28202527 ECH