Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1294 ATGACTGGCAGAGATATCCTCAATATGATGAAGGTGAAAGCAGGATTTGGAACATCAGTACCGGAGACAGGGAAAGGAAAAGGAAAAATATCAAAACACATTACACATGGCTTTCACTTGATGAAGGGAAGATCTGCACATCCCATGGAAGATTATTTAGTTTCAGAATTTAAGCAAGAAAAGGACAGAGAATTAGGCTTGTTTGCAATATTTGATGGCCACTTAGGCCATGATGTTGCAAGCTATTTGCAGAACCATCTTTTTCATAACATCTTGAAACAGCATGACTTTTGGACTGAGACAGAAAACGCAGTGAAGAGGGCTTATCTTGAAACTGATGAGAAAATATTGGAAAAGGCACTTGTGTTGGGGCGAGGAGGGTCAACAGCTGTAACTGCAATACTGATTGATGGTCAGAAGCTTGTAGTAGGAAATGTTGGTGACTCGAGAGCTGTTATTTGTGAGAATGGAAAGGCTAGGCAACTATCTGTAGATCATGAACCAAGCAAGGAAAAGAAATCTATTGAGAGGCGTGGGGGGTTTGTATCAAACATTCCAGGAGATGTCCCTCGAGTAGATGGACAGCTGGCAGTAGCAAGGGCTTTTGGTGATAGGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGTTGGTAGAAGAAGTACTTCATCATACAGAATTTCTTATTCTGGCTAGTGATGGAATATGGAAGGTTATGTCAAACCAAGAGGCAGTGGATTCCATTAGGCAAATAAAGGATGCTCAAGCTGCAGCAAAGCACTTGATAGAAGAGGCAGTTTCCAAGAAAAGTAAAGATGATATATCTTGCATAGTTGTGAGGTTTCAATGA 852 0.4096 MTGRDILNMMKVKAGFGTSVPETGKGKGKISKHITHGFHLMKGRSAHPMEDYLVSEFKQEKDRELGLFAIFDGHLGHDVASYLQNHLFHNILKQHDFWTETENAVKRAYLETDEKILEKALVLGRGGSTAVTAILIDGQKLVVGNVGDSRAVICENGKARQLSVDHEPSKEKKSIERRGGFVSNIPGDVPRVDGQLAVARAFGDRSLKMHLSSEPDVLVEEVLHHTEFLILASDGIWKVMSNQEAVDSIRQIKDAQAAAKHLIEEAVSKKSKDDISCIVVRFQ* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1294 283 CDD PP2Cc 36 282 IPR001932 -
Pvu11g1294 283 ProSiteProfiles PPM-type phosphatase domain profile. 35 282 IPR001932 -
Pvu11g1294 283 PANTHER PROTEIN PHOSPHATASE 2C 1 283 IPR015655 GO:0004722|GO:0006470
Pvu11g1294 283 SUPERFAMILY PP2C-like 32 282 IPR036457 -
Pvu11g1294 283 PANTHER PROTEIN PHOSPHATASE 2C 39-RELATED 1 283 - -
Pvu11g1294 283 Gene3D - 18 283 IPR036457 -
Pvu11g1294 283 Pfam Protein phosphatase 2C 45 275 IPR001932 -
Pvu11g1294 283 SMART PP2C_4 24 280 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1294 Pvu-Chr11 26795874 26798494 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1294 24 283 PP2C-type Phosphatase Gene Family AT4G28400 74.231 6.66e-145 405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1294 K17506 - gmx:100819846 516.538