Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1274 ATGTTCAGCAGAATGTTCCTGTTTTTTCTTTACTTCCTCTTCCTTCTCTCTCCTCCGGGACTCTCTCTCTCTCTAACCCAAGACGGTCTTTTCCTCCTCCAGGCGCGCAGTTGCCTCTCCGACCCCAACAACTCACTCTCCTCCTGGAACGCCGCCGCCTCCACCCCGTGCCGCTGGAGGGGCGTCACCTGCGACCATCATTCAGCAGCAGTGACTGCCCTCGATCTCTCCTTCTCCTTCCTCTCCGGCCCCTTCCCCGCCGCCCTCTGCCGCCTCCCCTCCCTCTCCTCCCTCAACCTCTCCTACAACCTTATCAACTCCACCCTCTCCACGGTCTCCCTCTGCCGCTTCCTCCTCTATCTCGACCTCTCTCAAAACGCCCTCGTGGGCCCCATCGATTCCCTCGCCACACTCACCTCCCTCCGCTACCTCGACCTCTCAGGCAACAACCTCACCGGCGAAATTCCGGAGAGCCTCGCCGCCCTACCCCACCTCGAAACGCTCAACCTCGTTAGCAATCTTTTCACCGGCACCATCCCTGCTTCACTCGGTAACCTCACTTTGCTGAAACGCCTTCAACTCGCTTACAACCCCTTCAAGCCGGGTCCCATACCGAGAGAACTGGGTAACCTTGGAAACCTTGAAACGCTTTATCTCGCTCTGTGCAACCTGGAAGGTCCCATTCCTGACACCTTTAGCAATCTCGTTAACTTGATAAGCCTCGACTTGTCTCAGAACAGCATCACCGGTCACATTCCGCAATGGTTCACGCGTTTCACGCGCGTCACCCAAATTGAGCTTTACAATAATTCGCTCTCCGGGAAGCTACCCAGAGGAATGTCGAAGATGACGAGTTTGAAATTATTCGACGCGTCCAGGAACGAGTTGACTGGGACCATTCCGACCGAGTTGTGCGAGTTGCCACTCGAGTCTCTGAATTTAAATGAGAACAAACTCGAAGGGATTTTGCCGGGGGCCATTGCGCGTTCTCCGAACCTCAGTGAACTCAAACTTTTCAGTAACAGACTCATCGGAACGTTGCCGAGTGACTTGGGGAGTAACTCACCGTTGAACCAGATTGACGTTTCGTTTAACCGGTTTTCTGGCGAAATTCCCGCGAATATTTGCCGGCGGGGGCAGCTTGAGCAGCTAATCTTGATATACAATTCGTTTTCGGGTGAAATTCCCGAGAGTCTCGGGAAATGCAAGAGTTTAACGAGGGTTCGGTTAAGGAACAATAATCTCTCGGGAAGTGTTCCTGAAGGGGTTTGGAGTTTGCCCCGTTTGCATTTGCTTGAGCTTTTGGAAAATTATTTTTCTGGGCACATTTCTAAGGGGATTTCTGGCTCTTCCAGCTTGTCAAATTTGTTGCTTTCTAATAACCGGTTTTCTGGGTCGATTCCTCAGGAAATTGGGTTATTGGACAGTCTTGTGGAGTTTGCTGCTAGTAATAATAATCTCTCGGGTCAGATTCCGGGGAGTATGGTAAAGATGAAGCAGTTGGTTAATCTCGATCTCAGTTGTAATCAACTTTCTAGTGATCTTAAATTTGGTGGAATTGGTTACTTGAATAAGGTCACTGACCTTAATTTGTCACATAATAGGTTGGATGGAAATGTTCCAAGTGAATTAGGAAGATTCCTTGTGCTTAATTCTCTTGATCTTTCTTGGAACAATTTCTCTGGGGAGATTCCATTGCAGTTGCAAAATTTGAGGCTATCTGAGCTGAATTTGTCTTACAACAAGCTCTCAGGGGATATTCCTCCTCTTTATGCCAATGCCAAGTATAAGACGAGTTTTATAGGGAATCCTGGCCTCTGTAGTCATCTCCCTGGGCTTAGTAATTGTTATGGTAGGAATAAGAACTGGAGGTATATGTGGATTTTGTGGTCCATTTTTGTGCTTGCTGGAGTTGTGTTCGTTATGGGGGTGGCATGGTTTTACTTTAGGTACAGGAAGGTGAAGAAATTGAAGAAAGGGTTTTACACTTCAAGTTGGAAATCATTTCACAAGCTGCGGTTTAGTGGGTTTGAGGTTACTAAGTTGCTGAATGAGGCCAATGTGATAGGAAGGGGAGCATCTGGGAAGGTGTACAAGGTGGTGCTTAGCAATGGTGAGGTGGTGGCAGTGAAAAAATTGAGTGGAGTCCCAGCGAAAGTGGATGAAAATGTTGGTTCTAGAAAAGATGAATTTGATGCTGAAGTAGAAACACTAGGGAGGATTAGGCACAAGAATATTGTGAGATTGTGGTGTTGCTGCAACAGTGGGGACCATAAGCTATTGGTTTTCGAATACATGCCAAATGGGAGCTTGGCTGATCTGTTACAGGGTAGCAAGAAGAGCTTATTGGATTGGCCTACTAGGTATAAAATTGTTGTTGATGCTGCTGAGGGGCTTTGTTATTTGCATCATGATTGTGTCCCACCCATTGTCCACAGGGATGTGAAATCTAACAATATATTGGTTGATGATGAGTTTGTGGCAAAAGTTGCAGATTTTGGAGTTGCCAAAATGGTTGCAAGAGCCGGCCAAGGGACAGAATCAATGTCTATTATTGCAGGATCATATGGCTACATTGCACCAGAATACGCATACACAATGAGGGTGAATGAGAAGAGTGACATATACAGCTTTGGAGTGGTGATTTTGGAGTTGGTAACTGGGAGACCCCCCATTGATCCAGAGTATAGTGAAAATGATTTGGTGAAATGGGTTTCCTCTGCATTGGAACATGAAGGACTGGATCATGTAATTGATCCTACATTGGACTCCAAACACAGGGAAGAAATAAGCAAGGTATTGAGTGTGGGTCTGCATTGCACCAGCTCCATCTCAATAACTCGCCCTACAATGAGAAAAGTGGTTAAAATGCTTCGTGAGGTAACAACAGTGCCCAAATGCACAAGTGTAAACGATGGAAATGACCCTTCTTACCATGAAGACTCGTCTCATTGTATCACTGAAGACTAG 2970 0.4704 MFSRMFLFFLYFLFLLSPPGLSLSLTQDGLFLLQARSCLSDPNNSLSSWNAAASTPCRWRGVTCDHHSAAVTALDLSFSFLSGPFPAALCRLPSLSSLNLSYNLINSTLSTVSLCRFLLYLDLSQNALVGPIDSLATLTSLRYLDLSGNNLTGEIPESLAALPHLETLNLVSNLFTGTIPASLGNLTLLKRLQLAYNPFKPGPIPRELGNLGNLETLYLALCNLEGPIPDTFSNLVNLISLDLSQNSITGHIPQWFTRFTRVTQIELYNNSLSGKLPRGMSKMTSLKLFDASRNELTGTIPTELCELPLESLNLNENKLEGILPGAIARSPNLSELKLFSNRLIGTLPSDLGSNSPLNQIDVSFNRFSGEIPANICRRGQLEQLILIYNSFSGEIPESLGKCKSLTRVRLRNNNLSGSVPEGVWSLPRLHLLELLENYFSGHISKGISGSSSLSNLLLSNNRFSGSIPQEIGLLDSLVEFAASNNNLSGQIPGSMVKMKQLVNLDLSCNQLSSDLKFGGIGYLNKVTDLNLSHNRLDGNVPSELGRFLVLNSLDLSWNNFSGEIPLQLQNLRLSELNLSYNKLSGDIPPLYANAKYKTSFIGNPGLCSHLPGLSNCYGRNKNWRYMWILWSIFVLAGVVFVMGVAWFYFRYRKVKKLKKGFYTSSWKSFHKLRFSGFEVTKLLNEANVIGRGASGKVYKVVLSNGEVVAVKKLSGVPAKVDENVGSRKDEFDAEVETLGRIRHKNIVRLWCCCNSGDHKLLVFEYMPNGSLADLLQGSKKSLLDWPTRYKIVVDAAEGLCYLHHDCVPPIVHRDVKSNNILVDDEFVAKVADFGVAKMVARAGQGTESMSIIAGSYGYIAPEYAYTMRVNEKSDIYSFGVVILELVTGRPPIDPEYSENDLVKWVSSALEHEGLDHVIDPTLDSKHREEISKVLSVGLHCTSSISITRPTMRKVVKMLREVTTVPKCTSVNDGNDPSYHEDSSHCITED* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1274 989 Gene3D Ribonuclease Inhibitor 179 278 IPR032675 -
Pvu11g1274 989 Gene3D Phosphorylase Kinase; domain 1 653 765 - -
Pvu11g1274 989 SMART LRR_typ_2 304 329 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 211 234 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 235 258 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 92 115 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 138 161 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 162 186 IPR003591 -
Pvu11g1274 989 SMART LRR_typ_2 523 547 IPR003591 -
Pvu11g1274 989 PANTHER RECEPTOR-LIKE PROTEIN KINASE 5 5 982 - -
Pvu11g1274 989 SUPERFAMILY Protein kinase-like (PK-like) 676 958 IPR011009 -
Pvu11g1274 989 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 5 982 - -
Pvu11g1274 989 SMART serkin_6 683 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1274 989 Gene3D Ribonuclease Inhibitor 279 619 IPR032675 -
Pvu11g1274 989 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pvu11g1274 989 Gene3D Transferase(Phosphotransferase) domain 1 766 977 - -
Pvu11g1274 989 ProSiteProfiles Protein kinase domain profile. 683 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1274 989 Pfam Leucine rich repeat 140 198 IPR001611 GO:0005515
Pvu11g1274 989 Pfam Leucine rich repeat 213 272 IPR001611 GO:0005515
Pvu11g1274 989 SUPERFAMILY RNI-like 265 592 - -
Pvu11g1274 989 SUPERFAMILY L domain-like 35 371 - -
Pvu11g1274 989 ProSiteProfiles Leucine-rich repeat profile. 572 594 IPR001611 GO:0005515
Pvu11g1274 989 ProSitePatterns Protein kinases ATP-binding region signature. 689 719 IPR017441 GO:0005524
Pvu11g1274 989 Pfam Protein kinase domain 685 955 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1274 989 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Pvu11g1274 989 ProSitePatterns Serine/Threonine protein kinases active-site signature. 810 822 IPR008271 GO:0004672|GO:0006468
Pvu11g1274 989 ProSiteProfiles Leucine-rich repeat profile. 140 163 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1274 Pvu-Chr11 25757877 25761611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1274 23 983 Receptor kinase-like Gene Family AT1G28440 56.180 0.0 1067
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pvu11g1274 Pkinase 9.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1274 - - gmx:100796415 1426.77