Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1273 ATGACTCAGTGCAGTGACCCTGAAAACAATCATCATAACATCATAGCGGAGGGACGAAAGGATAGCTTAATTAGAACTTGTCCTACATGTGGTCATCATATCAAATGCCAAGAACAGGGAGGTGGAATTCATGACCTACCTGGACTTCCTGCTGGTGTGAAGTTTGATCCTACAGATCAAGAGATTCTTGAACATTTGGAAGCCAAGGTGCGATCTGATATTCATAAGCTTCATCCTCTAATTGATGAGTTCATTCCCACACTTGAAGGCGAGAATGGAATCTGCTATACTCATCCAGAGAAGTTGCCAGGAGTTAGCAAAGATGGTCTGATCCGCCATTTCTTTCACCGGCCTTCCAAGGCATACACCACAGGAACAAGGAAAAGGAGAAAGGTGAACTCAGATGAAGATGGCAGTGAGACACGTTGGCACAAAACAGGTAAAACTAGGCCAGTCTACAACAGTGCCAAGTTGAAAGGGTACAAGAAAATCCTTGTACTTTACACAAACTATGGAAAGCAAAGAAAGCCAGAGAAAACAAACTGGGTCATGCACCAATACCATCTTGGCAGTGATGAAGAGGAAAAAGAAGGAGAGTTAGTGGTGTCTAAAGTTTTTTACCAAACACAGCCTAGACAATGTAGTTCTCTCATCAAAGACTCATCAGTTCCTGGGAAACATATGAAGGGTCAAAGTGTGCATGAGGTGATCAATAACAAAAACAAAAACAACGGCTTTGTTGAGTACTACCATTCAAATTTCATCTCATTTGATCAAGGAGCTCAACATAGACCTACCACTGCTCAAGTAATTCCCCACTTTCCTGTCCATGAAGCTGCTCCTTTCAACATTCCTTGA 858 0.4231 MTQCSDPENNHHNIIAEGRKDSLIRTCPTCGHHIKCQEQGGGIHDLPGLPAGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGLIRHFFHRPSKAYTTGTRKRRKVNSDEDGSETRWHKTGKTRPVYNSAKLKGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEEKEGELVVSKVFYQTQPRQCSSLIKDSSVPGKHMKGQSVHEVINNKNKNNGFVEYYHSNFISFDQGAQHRPTTAQVIPHFPVHEAAPFNIP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1273 285 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 282 IPR044799 GO:0003700
Pvu11g1273 285 MobiDBLite consensus disorder prediction 122 148 - -
Pvu11g1273 285 Pfam No apical meristem (NAM) protein 50 189 IPR003441 GO:0003677|GO:0006355
Pvu11g1273 285 Gene3D NAC domain 58 212 IPR036093 GO:0003677|GO:0006355
Pvu11g1273 285 MobiDBLite consensus disorder prediction 128 147 - -
Pvu11g1273 285 ProSiteProfiles NAC domain profile. 49 208 IPR003441 GO:0003677|GO:0006355
Pvu11g1273 285 SUPERFAMILY NAC domain 44 208 IPR036093 GO:0003677|GO:0006355
Pvu11g1273 285 PANTHER NAC TRANSCRIPTION FACTOR-LIKE PROTEIN 1 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1273 Pvu-Chr11 25661581 25664190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1273 1 223 NAC Transcription Factor Family AT4G28500 70.213 7.14e-116 333
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu11g1273 NAM 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1273 - - gmx:100797459 566.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1273 11 25661581 25664190 Pvu11g1273 11 25661581 25664190 ECH
Pvu6g1884 6 29094313 29098175 Pvu11g1273 11 25661581 25664190 ECH