Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1261 ATGAGTGTTCACCACGAAGATCAGTCTTCTAAACTATTTCAATCTCAAACCCACATATTGAACCAAACTTTTGGTTTCATAAACTCTATGTGCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATACACAAGTATGGCAAACCTATGCCACTCTCACAACTCATTGCTTCACTCCCAGTTCATCCTTCCAAGACTTGCTTTATTTCCCGCTTGATGCAAATCTTGGTCCACTCTGTTTTGTTCAATCCATGGTTTCAATTCTCCACTTGGTTCACAAATGATGACCCTACACCATTTCACACACAAAATGAGATGACTTTGTGGGACTATGCTAGCCGTGAGCCCAAATTCAATCACCTTTTCAATGATGCCATGACTAATGACACTCGATTGATTTCCAGTGTGGTGATTGAGAAGTGCAAGGGAGTGTTGCAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACTTTGGCTAAGGCAATTGCCAACTCATTTCCACACTTGAACTGCATTGTCTTTGATCTCCCACATGTTGTTCATGGCTTGCAAGGAACGGATAACATAAAATATGTTGGAGGGGACATGTTTGAAACAATCCCTTCTGCTGATTCCATCATGTTGAAG 639 0.4131 MSVHHEDQSSKLFQSQTHILNQTFGFINSMCLKCAIDLCIPDVIHKYGKPMPLSQLIASLPVHPSKTCFISRLMQILVHSVLFNPWFQFSTWFTNDDPTPFHTQNEMTLWDYASREPKFNHLFNDAMTNDTRLISSVVIEKCKGVLQGLESLVDVGGGTGTLAKAIANSFPHLNCIVFDLPHVVHGLQGTDNIKYVGGDMFETIPSADSIMLK 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1261 213 Gene3D Vaccinia Virus protein VP39 110 213 IPR029063 -
Pvu11g1261 213 Gene3D - 2 93 IPR036388 -
Pvu11g1261 213 Pfam Dimerisation domain 30 78 IPR012967 GO:0046983
Pvu11g1261 213 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 213 IPR016461 GO:0008168
Pvu11g1261 213 Pfam O-methyltransferase domain 88 213 IPR001077 GO:0008171
Pvu11g1261 213 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 71 212 IPR029063 -
Pvu11g1261 213 PANTHER ORCINOL O-METHYLTRANSFERASE 83 213 - -
Pvu11g1261 213 PANTHER ORCINOL O-METHYLTRANSFERASE 6 83 - -
Pvu11g1261 213 SUPERFAMILY "Winged helix" DNA-binding domain 8 86 IPR036390 -
Pvu11g1261 213 PANTHER O-METHYLTRANSFERASE 6 83 IPR016461 GO:0008168
Pvu11g1261 213 PANTHER O-METHYLTRANSFERASE 83 213 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1261 Pvu-Chr11 22303320 22304088 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1261 30 213 Monolignol Biosynthesis Gene Families AT5G54160 28.017 2.99e-28 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1261 - K16040 pvu:PHAVU_011G1223001 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1261 11 22303320 22304088 Pvu11g1261 11 22303320 22304088 ECH