Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1256 ATGTGCCTTAAATGTGCAATTGATTTGTGCATACCTGATGTCATACACAAGTATGGCAAACCTATGCCACTCTCACAACTCATTGCTTCACTCCCAGTTCATCCTTCCAAGACTTGCTTTATTTCCCGCTTGATGCAAATCTTGGTCCACTCTGGTTTTTTCTCTCAACACATTGTCACTCATAATAATCAAGAAGTGAGTTATGTGTTAACTGATGCATCTATACTACTCCTTAAGGACCATCCCTTTCGTATGACATGTTTGCTACAAGTCATACTTGATCCAGTTTTGTTCAATCCATGGTTTCAATTCTCCACTTGGTTCACAAATGATGACCCTACACCATTTCACACACAAAATGAGATGACTTTGTGGGACTATGCTAGCCGTGAGCCCAAATTCAATCACCTTTTCAATGATGCCATGACTAATGACACTCGATTGATTTCCAGTGTGGTGATTGAGAAGTGCAAGGGAGTGTTGCAAGGATTAGAGTCTTTGGTTGATGTTGGGGGAGGAACAGGAACTTTGGCTAAGGCAATTGCCAACTCATTTCCACACTTGAACTGCATTGTCTTTGATCTCCCACATGTTACTGTAATGCATAACTGGAACGATGAGGAATGCTTGAAAATCCTGAAGAGATGTAAGGAGGCAATCAAAAACAAAGATAAAGGAAAAGTGATTATCATAGACACGGTGATAGGAAACGTGAAAGGAGACAGTGAATCAGAACAAACAAAGCTCTACTATGATATGGAGATGATGGTGTTGGTTACTGGAAAACAGAGAAATGAGAAAGATTGGGCTAAGTTGTTCTTTTCTGCAGGGTTCAATCACTACAAGATAACTCAAGTTCTAGGTTTCAAGTCTCTCATAGAGGTTTATCCATAG 894 0.4004 MCLKCAIDLCIPDVIHKYGKPMPLSQLIASLPVHPSKTCFISRLMQILVHSGFFSQHIVTHNNQEVSYVLTDASILLLKDHPFRMTCLLQVILDPVLFNPWFQFSTWFTNDDPTPFHTQNEMTLWDYASREPKFNHLFNDAMTNDTRLISSVVIEKCKGVLQGLESLVDVGGGTGTLAKAIANSFPHLNCIVFDLPHVTVMHNWNDEECLKILKRCKEAIKNKDKGKVIIIDTVIGNVKGDSESEQTKLYYDMEMMVLVTGKQRNEKDWAKLFFSAGFNHYKITQVLGFKSLIEVYP* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1256 297 Pfam Dimerisation domain 1 49 IPR012967 GO:0046983
Pvu11g1256 297 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 83 296 IPR029063 -
Pvu11g1256 297 Gene3D Vaccinia Virus protein VP39 79 198 IPR029063 -
Pvu11g1256 297 PANTHER O-METHYLTRANSFERASE 1 198 IPR016461 GO:0008168
Pvu11g1256 297 PANTHER O-METHYLTRANSFERASE 199 297 IPR016461 GO:0008168
Pvu11g1256 297 Gene3D Vaccinia Virus protein VP39 199 297 IPR029063 -
Pvu11g1256 297 Gene3D - 1 77 IPR036388 -
Pvu11g1256 297 SUPERFAMILY "Winged helix" DNA-binding domain 1 82 IPR036390 -
Pvu11g1256 297 PIRSF O-mtase 1 200 IPR016461 GO:0008168
Pvu11g1256 297 PIRSF O-mtase 199 297 IPR016461 GO:0008168
Pvu11g1256 297 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 297 IPR016461 GO:0008168
Pvu11g1256 297 PANTHER ORCINOL O-METHYLTRANSFERASE 1 198 - -
Pvu11g1256 297 PANTHER ORCINOL O-METHYLTRANSFERASE 199 297 - -
Pvu11g1256 297 Pfam O-methyltransferase domain 104 198 IPR001077 GO:0008171
Pvu11g1256 297 Pfam O-methyltransferase domain 199 279 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1256 Pvu-Chr11 21395529 21396848 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1256 1 283 Monolignol Biosynthesis Gene Families AT5G54160 28.173 1.76e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1256 - K16040 gmx:100793263 499.975
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1256 11 21395529 21396848 Pvu11g1256 11 21395529 21396848 ECH