Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1236 ATGTCTGGAAAGGCTTTGAAATCCTTGAAGGATGAAAACCCAGATTTGCAGAAGCAAATTGGGTGCATAACAGGATTTTTTCAGCTCTTTGACCGCCACCGTTTCCTCACAGGCCAACGCTCTGCCACCTACATTCAGCACAGGCCTACTTCAGGTGATAGCAGCTATGGAATTAAAGAGCTCAATGGTGCAATGCTGAAAACTAAGGCAAAGAATCTGAAGAGTGGTAGAGAAAAGCAACAATTCTCCACAGAATCATCCATAACTTCTTTGTCTTCATCCTCTTGTTCATCTAGCATGTCATCCCTTGAGTTTAACAGAACAATTCAGATGCAATCATCATCAAGAAATCAAACAAGAATCCCTGAAAACACAAAATCAAAAGTAGCAAAGAAGCAACTTGATACCTCGCGCCAACAATCCCATTTCCATCATATTGTCAAAGACTCAATGCATAAAGAAGCTCAAGGATTGTCTGTGAAAACTGTGGCTGAAGGGGAAAAGAAGAGTCATACTAATACCCTGAAACTCATAGACTCTCCCCGGCCTTTGCGGTCACACAAATCTATGAATGCTGGAGTTTCAGTTGCAAGCGAACCGTTCCATACTATTGCCAAGTCCAAGAAAACAACTTGGGACTCACCACGGCTCTCTTATGATGAAACATTCAAATCTGCCACAAAGCATAAGGAATTCCCAAGGCTTTCCTTGGACAGCAGACAAGGCTCCAACAGAGGTTCCAATGAAGGAAACAAGTCTCGCAACCTGTTGAAGGGTCAACAGAAAGGTTATGCAAAGAACTCTAGCACAATGATTAACCAGCTGCAAGAGCCAGAAACTTCCAAAAGATCTTCCAGTGTTGTAGCAAAGTTGATGGGACTTGAGGCACTCCCGGAGCGTACACGAACTTGTGGGAGTCCAATTGGAACTTCTAGTTGCTCTAGCACAAGTGATGAAGATAAGCACCGCCAAAAATTCACCTTGCCACAGTTTAGAAAGGCTGACTCAACCACAAATGAGAAGCCATATTCACGATTTGCATTAGAATCAACTCCTTGGGGACAACCTGATGGAATCCAAATTTCTCAAACTTCCAAGAGTTGTGAATCTGATATAAAAGCCTCAAAGACCTCTCTCACGGTATATGGGGAAATTGAGAAAAGGGTGGCAGAACTTGAGTTCAAAAAGTCTGGAAAGGATCTCAGAGCCCTTAAACATATTCTTGAAGCAATGCAGAGACGTGAAGATTCGTTAGACATTGCTAGAGATCAGACTTCGAATTCTCCATCTGACAGTAGGAATAGTACTAATTCCAATGAAAGCTCGAACTTACATAGCCCACGAGTACGACAGAAAAACCTTTCATCTGTCACGGTTGAGATGTCAAATTCTACACGGGGTAGTAAATTGCCAATTGTCATCATGAAACCTGCGAAAGTTACTAGAAAAGTCAATAGTCCTTCTTCTACAGAATTATCAGTTCATGGTAAATCTGGTCTCAGCAAGTGTTCCCCTAGTAATCCAACAAATGGAAGATTGGTTGACAAGCATTGTGCTAAAGGCATAAGTCCAACAAAAAATATCAAGGATCCTTTTGGCCAACCGGTTCGTCCATCACACAAAAACACGAGAACTTCAAAACTGATGCAATCCTTGAAAGTTTCTGAGGACAGCACTGGAGAATGCACCACCAATTCTGGTTATACAACTGTGACTGGGAGCCCCAGATTACAAAAGAAGTTTGGTCTGGAGAGGTGTTCACAACCAACTAGTCCATCATCAGATTCCTGCATTAACAGAAGAGAGCACAATAGGCAACATGTGGAATTGTCTTCTCCAAGTACAACACCAAGACATGAGTTCTCCAGTTTGCAGCAGATAAATGAACGTTTCAGCGAGATCAGTAGTAATTGGAGGGATTTTAAGCACCGTGTTAATGTAATTCCGGACTTCGAAGACAAAAGCAGCTTGGCCCGTCATAGTGAGATTGAAGTCATACGAATTGATCAAACTGGAAAGATCATTAGCTCCTCCATCCAGCTGAGTTGCATGAATCAAAATAATGCATTTGAAGAGATGAGGAAGGCTGAGACAATGGTTACTGCGGAACAACCAAGTCCCGTGTCTGTTCTTGATGCTGCTTTCTATAGAGATGACCCACCATCTCCAGTGAAAAAGAAACCAGACATCTCAAAATATTTAGGTGAAGCTCAAAGCACTGATGATGATAGTGAAGAGAATTCAGTGGATATACTTCAAGATATTGACTGGATTGAAGAGAAATTCATCTTCAATACCACTAAGCATCCTGACCATAAGTATATAACAGAAATACTGTTAGCATCAGGTCTGCTCAGTGGCCACAGCTCTAGCCAAATATTTCATTCGCCAGGTCAGTTGATTAATCCAAAGTTGTTCTATGCACTTGAACAAGTGAAGACAAAGAGACATTTCATTGAAGATAATGCCAAGAAGGTTGCCAGGTTTAAAAAGTCTGAGCAGATGCAAAGAAAACTCATATTTGATGTTGTCAACGACATTTTAGTTCAAAAGCTGATATTAGTTAGTTCTTCTGCATTGGGGTGCCAACCAAATGGGTTCGCAGGCACAACACCAAAATGGCAGCAGCTTTTGGATGAGCTGTGCACAGAAATTGAACAGTTGCAACCTAAAAATGGTGTCAGTTTAGGTGGTGAGGATGAGAATTTGAAGCATCAGCATGCAATTTGGAGTAACTGCTGCACTGAGATACCAAATATTGTGTTGGATATTGAACGTTTGATCTTTAAAGATTTGATAACGGAGGTAGTGAGAGGTGAAGTAGCAAGCCATTCTGGTACACATTGCAGGCAACTAGTGTTTTTGAAGTAG 2871 0.4155 MSGKALKSLKDENPDLQKQIGCITGFFQLFDRHRFLTGQRSATYIQHRPTSGDSSYGIKELNGAMLKTKAKNLKSGREKQQFSTESSITSLSSSSCSSSMSSLEFNRTIQMQSSSRNQTRIPENTKSKVAKKQLDTSRQQSHFHHIVKDSMHKEAQGLSVKTVAEGEKKSHTNTLKLIDSPRPLRSHKSMNAGVSVASEPFHTIAKSKKTTWDSPRLSYDETFKSATKHKEFPRLSLDSRQGSNRGSNEGNKSRNLLKGQQKGYAKNSSTMINQLQEPETSKRSSSVVAKLMGLEALPERTRTCGSPIGTSSCSSTSDEDKHRQKFTLPQFRKADSTTNEKPYSRFALESTPWGQPDGIQISQTSKSCESDIKASKTSLTVYGEIEKRVAELEFKKSGKDLRALKHILEAMQRREDSLDIARDQTSNSPSDSRNSTNSNESSNLHSPRVRQKNLSSVTVEMSNSTRGSKLPIVIMKPAKVTRKVNSPSSTELSVHGKSGLSKCSPSNPTNGRLVDKHCAKGISPTKNIKDPFGQPVRPSHKNTRTSKLMQSLKVSEDSTGECTTNSGYTTVTGSPRLQKKFGLERCSQPTSPSSDSCINRREHNRQHVELSSPSTTPRHEFSSLQQINERFSEISSNWRDFKHRVNVIPDFEDKSSLARHSEIEVIRIDQTGKIISSSIQLSCMNQNNAFEEMRKAETMVTAEQPSPVSVLDAAFYRDDPPSPVKKKPDISKYLGEAQSTDDDSEENSVDILQDIDWIEEKFIFNTTKHPDHKYITEILLASGLLSGHSSSQIFHSPGQLINPKLFYALEQVKTKRHFIEDNAKKVARFKKSEQMQRKLIFDVVNDILVQKLILVSSSALGCQPNGFAGTTPKWQQLLDELCTEIEQLQPKNGVSLGGEDENLKHQHAIWSNCCTEIPNIVLDIERLIFKDLITEVVRGEVASHSGTHCRQLVFLK* 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1236 956 MobiDBLite consensus disorder prediction 125 139 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 230 323 - -
Pvu11g1236 956 PANTHER LONGIFOLIA PROTEIN 748 955 - -
Pvu11g1236 956 PANTHER LONGIFOLIA PROTEIN 1 750 - -
Pvu11g1236 956 PANTHER LONGIFOLIA PROTEIN 1 750 IPR033334 GO:0051513
Pvu11g1236 956 PANTHER LONGIFOLIA PROTEIN 748 955 IPR033334 GO:0051513
Pvu11g1236 956 MobiDBLite consensus disorder prediction 538 576 - -
Pvu11g1236 956 Pfam Domain of unknown function (DUF4378) 771 935 IPR025486 -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 237 287 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 415 619 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 482 511 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 422 469 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 73 98 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 79 98 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 110 124 - -
Pvu11g1236 956 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1236 Pvu-Chr11 21095184 21100402 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1236 1 943 TRM (TON1 Recruiting Motif) Superfamily AT5G15580 30.077 1.23e-84 290
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1236 - - vun:114182931 1520.37