Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1234 ATGGCTTTTCTGGGTCTTTTGTTTTCGATGATTCCTATGTTGCTTCTTGTTGGGTCATCACCTAGGTTTCAAGCTGAGGCAAGGCAATTTGATGTTGGTGGGAGAGATGGGTGGGTGGTGAAGCCTTCTGAAGACTACAACCACTGGGCTCAGAGGAACAGATTTCAAGTCAATGACACTCTCCATTTCAAGTACAACAAAGGCATTGATTCAGTTGTGGAGGTGAAGAAGGAGGATTTCGATTCGTGCAACACCAACAATCCTATTCAGAAGACGGACGATGGTGATTCAATTTTCCCACTTTCTCATTCGGGTCTCTTTTACTTCTTAAGTGGCAACCTTGACAACTGCAAGATCGGTCAAAAACTCATTGTTCTTGTCATGGCTGTGAGACAACCTCTTCCCAAGGCTGCGCCACCGCCAGCAAGCACCCTGCCGCCGCAGACTGTTCCGGCAACCGGGTTGACCTCTCCGGCGCCGCCCCCATCGGACAAATCGGGCTCAGGGAGGGTTGGTGTGGATTTGGGAGTTTTGGTTGGTTTTGTGTTGGGTGGGTTTGTAGGGTTGGCTTAG 573 0.4956 MAFLGLLFSMIPMLLLVGSSPRFQAEARQFDVGGRDGWVVKPSEDYNHWAQRNRFQVNDTLHFKYNKGIDSVVEVKKEDFDSCNTNNPIQKTDDGDSIFPLSHSGLFYFLSGNLDNCKIGQKLIVLVMAVRQPLPKAAPPPASTLPPQTVPATGLTSPAPPPSDKSGSGRVGVDLGVLVGFVLGGFVGLA* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1234 190 Pfam Plastocyanin-like domain 38 121 IPR003245 GO:0009055
Pvu11g1234 190 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Pvu11g1234 190 PANTHER BLUE COPPER PROTEIN 14 139 IPR039391 GO:0009055
Pvu11g1234 190 Gene3D - 26 131 IPR008972 -
Pvu11g1234 190 CDD OsENODL1_like 28 128 IPR041846 -
Pvu11g1234 190 MobiDBLite consensus disorder prediction 137 158 - -
Pvu11g1234 190 PANTHER EARLY NODULIN-LIKE PROTEIN 1 14 139 - -
Pvu11g1234 190 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Pvu11g1234 190 MobiDBLite consensus disorder prediction 137 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1234 Pvu-Chr11 20734187 20735526 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1234 7 162 Phytocyanin Superfamily AT4G28365 48.077 6.53e-47 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1234 - - gmx:100803858 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1234 11 20734187 20735526 Pvu11g1234 11 20734187 20735526 ECH
Pvu5g1061 5 30567349 30568053 Pvu11g1234 11 20734187 20735526 PCT