Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1227 ATGTCAAAGCTTCTTCTGTCTTCCCTTTTTCTCACCACAAACCTTATCCTTCTAACCTCAGTTTCATCCACAGAGTTCATCTACAACACCAACTTCAACTCTACCAACACCCTTGTCTGTGGCAACGCCACTATTGAATCTTCCATTCTTACCCTTACCAACCGTTCCACCTTTGCTGTTGGCCGTGCTTTCTACCCTTCCAAGATCCCCACCAAATCTTCCAACTCTTCAACCCCTTTACCTTTCGCAACCTCTTTCATTTTCTCCATTGCCCCATTCAAAGACCTTCTCCCTGGCCATGGCTTTGTCTTCATACTGTCACCTTCTGCAGGCACCACTGGGGTTAGTTCTGCTCAGCATCTTGGCCTCTTCAACTTTACCAACAATGGTGATCCCAACAACCATGTCTTTGGCATTGAGTTCGATGTGTTTAACAACCAAGAGTTCAATGACATCGATGACAATCATGTGGGGGTGGACATAAACTCTCTTGTTTCTTTTACTTCCCGTGCTGCTGGATTTTGGGGTGGGAAGGGTGGTGACAAGTTTGAGGATTTGAAGCTTAATAATGGTGAGAACTATCAGGTGTGGATTGAATATTTAGATTCTAGAGTTAATGTTACAATGGCTCTTGCAGGCCAAAATAGACCAAAGAAGCCTTTGATTAGTGAGCTTGTGGATCTTTCTGAAGTGCTTTTGGATGAAATGTATGTTGGATTTTGTGGGGCAACAGGGCAGCTAGTGGAGAGTCATAAGATTTTGGCTTGGAGCTTCAGTAACTCAAATGTTTCTATTGGTGATGCTTTAGTTACTACAAATTTGCCTTCATTTGTGCTTCCCAAAGAATCTAGTTTTAGGTCAAAAGGTTTTCTTGTAGGGATCACTGCAGGTGTTTTGTTTGTCATTGGTAGTGCAGTTGTAATATTTGTGTTTTTTCTCAGAAGAAAAAGGTGCCTAAGAAAGGAGGAGGAGGAAGATATTGAAGATTGGGAACAAGAGTATTGGCCACACCGTGTAAGATATGAGGACATTTATGCTGCAACTAAAGGATTTTCAGACCAAAATGTAATTGGGTTTGGAGGGAATGGAAAAGTATATAAAGGGCTTCTGCAAGGAGTACAAGTTGCAGTCAAAATAATTCCTTGTGACAGTGAACAGGGAATGAGAGCGTTTCTGTCTGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCTGTTGAGAGGTTGGTGTAAGAAAGAGAAAGGGAGCTTGATTTTAATCTATGACTACATGGATAATGGAAGTTTAGATAAAAGGATGTTTGATGGTGATGAGAACACAATTTTTGGGTGGGAGGAGAGAATGAAGGTGCTGAAGGATGTAGCTCATGGTATATTGTATTTGCATGATGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGATATGAATGCAAGGTTGGGGGATTTTGGACTTGCCACAATGCATCATCATGAGCAGATTGGTCACACCTCACAAGTGATTGGAACTGTTGGTTTCATGGCACTCCTTTCATATAAGGTCATTTTCGTAATTTTGTAG 1596 0.4154 MSKLLLSSLFLTTNLILLTSVSSTEFIYNTNFNSTNTLVCGNATIESSILTLTNRSTFAVGRAFYPSKIPTKSSNSSTPLPFATSFIFSIAPFKDLLPGHGFVFILSPSAGTTGVSSAQHLGLFNFTNNGDPNNHVFGIEFDVFNNQEFNDIDDNHVGVDINSLVSFTSRAAGFWGGKGGDKFEDLKLNNGENYQVWIEYLDSRVNVTMALAGQNRPKKPLISELVDLSEVLLDEMYVGFCGATGQLVESHKILAWSFSNSNVSIGDALVTTNLPSFVLPKESSFRSKGFLVGITAGVLFVIGSAVVIFVFFLRRKRCLRKEEEEDIEDWEQEYWPHRVRYEDIYAATKGFSDQNVIGFGGNGKVYKGLLQGVQVAVKIIPCDSEQGMRAFLSEISSLGRLKHRNVVLLRGWCKKEKGSLILIYDYMDNGSLDKRMFDGDENTIFGWEERMKVLKDVAHGILYLHDGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLATMHHHEQIGHTSQVIGTVGFMALLSYKVIFVIL* 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1227 531 Pfam Protein kinase domain 352 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1227 531 Coils Coil 313 333 - -
Pvu11g1227 531 Gene3D - 22 272 - -
Pvu11g1227 531 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Pvu11g1227 531 PANTHER - 13 520 - -
Pvu11g1227 531 SUPERFAMILY Concanavalin A-like lectins/glucanases 22 263 IPR013320 -
Pvu11g1227 531 CDD lectin_legume_LecRK_Arcelin_ConA 24 261 IPR001220 GO:0030246
Pvu11g1227 531 SUPERFAMILY Protein kinase-like (PK-like) 329 520 IPR011009 -
Pvu11g1227 531 ProSiteProfiles Protein kinase domain profile. 351 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1227 531 SMART serkin_6 351 529 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1227 531 Pfam Legume lectin domain 24 262 IPR001220 GO:0030246
Pvu11g1227 531 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VII.1 13 520 - -
Pvu11g1227 531 Gene3D Transferase(Phosphotransferase) domain 1 427 523 - -
Pvu11g1227 531 ProSitePatterns Protein kinases ATP-binding region signature. 357 378 IPR017441 GO:0005524
Pvu11g1227 531 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1227 Pvu-Chr11 19620326 19621921 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1227 21 520 Receptor kinase-like Gene Family AT4G04960 60.119 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Pvu11g1227 Lectin_legB 3.3e-62 CL0004
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1227 - - pvu:PHAVU_011G119200g 1021.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1071 5 30911983 30914466 Pvu11g1227 11 19620326 19621921 PCT
Pvu11g1227 11 19620326 19621921 Pvu5g1072 5 30915535 30917601 PCT