Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1223 ATGAACATCATACTTACCAATAACACCAATACTAGACAAATTGGTGTTGTTAAGTTCATTGCACAAGTAATAAAAGGTCGATGGTTTATGCTTTGTGCCTCCTTTTTTATCATGGGAGGATCAGGTGGTAGTTATGTCTTTGGATCATACTCTGAAGTAATCAAATCTACACAAGGTTATGATCAAAGCACCCTAAACCTTTTAGGGTTCTTCAAGGACCTAGGTGGAAATCTAGGTGCTCCTATTGGTCTCATTGGAGAGATTTCCCCTCCATGGTTAGTACTCCTTATGGGTTCAAGCCTTAACTTTGTTGGCTATTTCATGATTTGGCTTGTGGTCACTGGAAAAATACTCAAACCACCGATTTGGCAAGTTTGTCTTTACATTGCAATTGGTGTTAGTTCTCAAAACTTTGCCAACACTGGAATAATAACCACTTGTGTAAAAAACTTTCCAGAAAGCAGGGGAACAATATTGGGTGTGTTGAAGGGTTACATTGGTCTTAGTGGAGCCATCATGACCCAACTTTACCTGGCCATTTATGGTAATGATTCTGAGTCTCTCATCCTTCTTGTTGCATGGCTCCCTGCGGTTATTCCAGCAATATTTGCATGTGTAGTTCGATTCATGAAGGTTGGAACTAAGCAACCCAACGAGGAAAAAATAATAAACCAATTTCTTTTTGCATCAGTTGTACTTGCTATATTCATTATGGTAATGATCATTGTTCAGAAGCAAGTTGTTTTTTCCAAAGCAGCTTATGCCGGAAGTGCAACTGGTGTATGTATTCTTTTTATCCTCCCTTTGTTTATTGTTATTAGACAAGAGTTATCATTGTGGAACATCAAGGAAAAACTTGCACTTAGTGCTAATGAGGTGGTCATAGAGAAACCGGAAATAGTAGAACCTAAAGAATCATCACCAATTCCAGAAGAAAAAACCAAGGATCCAAAACTATCTTGCTTTGCCAACATATTCAACAAACCTGAAAGAGGAGAGGATCACACCATTCTACAAGCACTTGTAAGTATTGACATGTTGTTATTATTGACTTCATCGTTTGTTGGCTATGGAACAAATGTAACAGTGGTGGACAACTTGGGACAAATTGGCAAGTCACTAGGATACACTGGAAACACAGTGAAGTCATTTGTGTCACTTGTAAGCATTTGGAATTACTCTGGGAGGGTGTTGTCTGGTCTTGTATCAGATACTTTGCTTCGAAAGTACAAAGTTCCTCGTCCTATGTTGTTAGTTTTTTCGCATTTCCTTACATGCATTGGACACCTTCTTATTGTGTTTCCAAAACCCGGTTCAGTATACTTTGCATCAGTGATAATTGGATTCGCATTTGGTGTGTTATTGCCAATGTTGTATGCACTTGTTTCTGAACTCTTTGGCCTTAAACATTTTTCCACTCTACAAAATTGCGTCCTTATGGTTATTCCCATTGGATCATACGTGTTAAATGTTAGGGTTACAGGCTTCCTTTATGATCAAGAGGCAAAAAATCAACTCAAAAGAAGTGGCAAAGAGAGGTTGCAAGGCACAGAGTTGACATGTATTGGAACTGAATGCTACAAACACTCTTTAATAATAATGGCATGCCTATCTTTTTTAGCTGGATTAACTTCTTTGATTTTTGTGGCAAGGACCAGTAAGTTCTACAAAAGTGACATATACAAAAAATTCACACATGATGCAACAAGTGCAGAAACAAAGTTGACTACAACCTCGGTTATTCGTTATGAAGACAAAAGAGTGAACAATGAAGGTGTTGAACATTGA 1788 0.3803 MNIILTNNTNTRQIGVVKFIAQVIKGRWFMLCASFFIMGGSGGSYVFGSYSEVIKSTQGYDQSTLNLLGFFKDLGGNLGAPIGLIGEISPPWLVLLMGSSLNFVGYFMIWLVVTGKILKPPIWQVCLYIAIGVSSQNFANTGIITTCVKNFPESRGTILGVLKGYIGLSGAIMTQLYLAIYGNDSESLILLVAWLPAVIPAIFACVVRFMKVGTKQPNEEKIINQFLFASVVLAIFIMVMIIVQKQVVFSKAAYAGSATGVCILFILPLFIVIRQELSLWNIKEKLALSANEVVIEKPEIVEPKESSPIPEEKTKDPKLSCFANIFNKPERGEDHTILQALVSIDMLLLLTSSFVGYGTNVTVVDNLGQIGKSLGYTGNTVKSFVSLVSIWNYSGRVLSGLVSDTLLRKYKVPRPMLLVFSHFLTCIGHLLIVFPKPGSVYFASVIIGFAFGVLLPMLYALVSELFGLKHFSTLQNCVLMVIPIGSYVLNVRVTGFLYDQEAKNQLKRSGKERLQGTELTCIGTECYKHSLIIMACLSFLAGLTSLIFVARTSKFYKSDIYKKFTHDATSAETKLTTTSVIRYEDKRVNNEGVEH* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1223 595 Gene3D MFS general substrate transporter like domains 22 220 IPR036259 -
Pvu11g1223 595 Gene3D MFS general substrate transporter like domains 341 557 IPR036259 -
Pvu11g1223 595 CDD MFS_Mch1p_like 26 541 - -
Pvu11g1223 595 SUPERFAMILY MFS general substrate transporter 18 217 IPR036259 -
Pvu11g1223 595 Pfam Nodulin-like 27 273 IPR010658 -
Pvu11g1223 595 SUPERFAMILY MFS general substrate transporter 257 554 IPR036259 -
Pvu11g1223 595 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4 10 572 - -
Pvu11g1223 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1223 Pvu-Chr11 19448741 19450528 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1223 17 579 Nodulin-like Gene Family AT2G28120 56.261 0.0 656
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1223 - - gmx:100799928 868.996