Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1221 ATGGCGTATAACAGTGGAATGTCCAGCAAGGAGGGTGCTGAAGAGACCCAGCAGCACAAAGTGTTTGGTGAAAGTGAAGGCCAAGATTCGGAGAAAGAGAAGAGAAAGGGTGTGGATTTGAGCTCAGGGAGGAGACAATGGAAGCCAGTTTTTGATGATGCTTCTATCTCAGAAAGGCCTCTCAAGAAAATCCGCAGCCCCGAACGCCAAAATCCCAATCAACAACCTTCTTCATCATCCTCCTCTATGCTCTCTCTCCAACCTCCTTCATCAAGAATAGTGTTTCCTTTTGCTTTTGAAGGCTCTCAACACCCAATGCCATCATTCCCACACTCATTTGGAACCCCAAACTTGCCTCTTTTTCGTCCCCCTCTTCAGCCAACGCAACAAATGATATCGTTTGGATCCCAACAGAACATGGGGTATCCACCATTCCTATGCCCAGATTCCACCATATCAAACCAACCACAGCTCCAACAGCAGCAGCAGCAGCAGCAGCTTCTTCAGTATTGGAATGACGCACTCAATTTGAGTCCAAGAGGGAGGATGATGATGATGATGAACCGGTCAGGGCATGAAGGGAGACCAATGTTAAGGCCTCAAGGACAGCCTTTGAATGCCACCAAGCTCTATAGGGGAGTAAGGCAACGCCATTGGGGCAAATGGGTTGCTGAAATTCGTCTCCCTCGCAATAGAACTCGTCTCTGGCTTGGAACCTTCGACACTGCTGAAGATGCTGCTATGGCTTATGATCGTGAAGCCTTTAAGCTTAGAGGAGAAAATGCTAAGCTCAATTTCCCTGAACTCTTCCTTAACAAAGGTAAAGTAGAACCATCCCCACCTGCTCCTGCTTCTTCTTCCAACGAAGGTTCAACATCAACATCAAGCCAGAACACAAAGCAACCTGAGCCAGTTCCAGAAGAGACCAACACTGAGAGTGAGGACGTGCCACCAACTGAGACATTAGCAGAAGAGAATGCTGAAACCGAGGAAGGAGTTTCACAGCCTCAGGAATTGGTTTGGGGAGAGTGGTTCAATACAATTCCTGCAGGTTGGGGTCCGGGAAGTCCCGTGTGGGATGATTTAGACCCCAACAACAATCTTCTTTTGCATTCACAACTTCCCTTTGTGAATCCACCTCATCAAGAGTTCCGTCATGAAGCCGGTGCTGCTTCTCAGACACAACAAGATAACAACAACACAGAACCAGGTTCTTCCTCTCCCTCTTGTCCCATGAGGCCCTTCTTCTGA 1251 0.4804 MAYNSGMSSKEGAEETQQHKVFGESEGQDSEKEKRKGVDLSSGRRQWKPVFDDASISERPLKKIRSPERQNPNQQPSSSSSSMLSLQPPSSRIVFPFAFEGSQHPMPSFPHSFGTPNLPLFRPPLQPTQQMISFGSQQNMGYPPFLCPDSTISNQPQLQQQQQQQQLLQYWNDALNLSPRGRMMMMMNRSGHEGRPMLRPQGQPLNATKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAAMAYDREAFKLRGENAKLNFPELFLNKGKVEPSPPAPASSSNEGSTSTSSQNTKQPEPVPEETNTESEDVPPTETLAEENAETEEGVSQPQELVWGEWFNTIPAGWGPGSPVWDDLDPNNNLLLHSQLPFVNPPHQEFRHEAGAASQTQQDNNNTEPGSSSPSCPMRPFF* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1221 416 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF053 3 416 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 13 42 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 67 87 - -
Pvu11g1221 416 Pfam AP2 domain 211 259 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 MobiDBLite consensus disorder prediction 379 416 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 281 306 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 274 339 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 1 87 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 388 408 - -
Pvu11g1221 416 MobiDBLite consensus disorder prediction 308 327 - -
Pvu11g1221 416 SMART rav1_2 210 273 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 Gene3D AP2/ERF domain 210 268 IPR036955 GO:0003700|GO:0006355
Pvu11g1221 416 PRINTS Ethylene responsive element binding protein signature 211 222 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 PRINTS Ethylene responsive element binding protein signature 233 249 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 MobiDBLite consensus disorder prediction 51 66 - -
Pvu11g1221 416 CDD AP2 209 269 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 ProSiteProfiles AP2/ERF domain profile. 210 267 IPR001471 GO:0003700|GO:0006355
Pvu11g1221 416 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 3 416 - -
Pvu11g1221 416 SUPERFAMILY DNA-binding domain 210 268 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1221 Pvu-Chr11 19321983 19324035 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1221 20 361 AP2-EREBP Transcription Factor Family AT2G20880 45.070 4.13e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pvu11g1221 AP2 2.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1221 - - var:108339749 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1221 11 19321983 19324035 Pvu11g1221 11 19321983 19324035 ECH