Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1217 ATGCCTTTTTCTCAATTGTTTATAGTCCTTCTTTGGTCGTTTTCAACAACTGTTATATCTCTTGTTGGTGTTGTGAGTTTACCAAACAATGAAAGTGTTCCAGCAGTGATTGTGTTTGGGGACTCTATAGTAGATACAGGTAACAATAACTACATTAAAACCATAGTCAACTGTGATTTTCAACCATATGGCAAAGATTTTGGTGGAGGAAATCAACCAACTGGGAGGTTCAGCAATGGTTTAATCCCATCAGACTTCTTTGCTGCAAAATTTGAAGTCAAGAAGCTTTTGCCACCATATCTTGATCCAAATTTGAAACGTGAAGATCTCCTCACAGGTGTAAGCTTTGCAACTGGTGGTAGTGGATATGATCCTCTAACTTCTACAATAGCATTAGTGCCATCATTATCAGATCAACTAGACAAATTCAGGGAATACAAAAAAAAGATACAGGACATGATTGGAGAAAACACAACAACAATGATATCGAAAAGCATATACATCTTGTGCACAGGAAGCAATGACATTACCAATACTTTCTTTACATTACCATTTAGGCGACTGCAATATAATATTTCAACTTACACAGATTTCCTGACTTCAGAAGCTTCACAATTCTTACAAGAACTTTATGGACTTGGAGCTAGAAGGATTGGAATAACTGGTTTGACAAATATAGGGTGTGTGCCCTTTCAAAGAACATTCAAAGGAGGCATTAAGAGAGCATGTTCAGATCTTGAAAATCAGGCTGCAATGCTCTTCAACAACAAGCTTTCATCCCAAATAGATGCCCTTGGGAAACTTCTTCCAGATGCTAGACTTGTCTACCTTGATATTTACAACCCTTTATTGGATATGATTCAAAATCCAACTAAATATGGTTTTGAAGTGACAAATAAAGGATGTTGTGGCACAGGAAAGTTTGAAGTAGGTTTTCTATGTAATCCTTTTACCCTGGAACTATGTTCAAACAGGTCAAACTACATATTTTGGGACAGTTTCCATCCTACAGAAAATGCCTATAATATACTTTGTTCTCAGGTGATTGATAAAAATATAAATGGATTCTTTTGA 1074 0.3613 MPFSQLFIVLLWSFSTTVISLVGVVSLPNNESVPAVIVFGDSIVDTGNNNYIKTIVNCDFQPYGKDFGGGNQPTGRFSNGLIPSDFFAAKFEVKKLLPPYLDPNLKREDLLTGVSFATGGSGYDPLTSTIALVPSLSDQLDKFREYKKKIQDMIGENTTTMISKSIYILCTGSNDITNTFFTLPFRRLQYNISTYTDFLTSEASQFLQELYGLGARRIGITGLTNIGCVPFQRTFKGGIKRACSDLENQAAMLFNNKLSSQIDALGKLLPDARLVYLDIYNPLLDMIQNPTKYGFEVTNKGCCGTGKFEVGFLCNPFTLELCSNRSNYIFWDSFHPTENAYNILCSQVIDKNINGFF* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1217 357 PANTHER GDSL ESTERASE/LIPASE EXL3 4 356 - -
Pvu11g1217 357 SUPERFAMILY SGNH hydrolase 35 350 - -
Pvu11g1217 357 Pfam GDSL-like Lipase/Acylhydrolase 36 345 IPR001087 GO:0016788
Pvu11g1217 357 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 36 47 IPR008265 GO:0006629|GO:0016298
Pvu11g1217 357 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 356 - -
Pvu11g1217 357 CDD SGNH_plant_lipase_like 34 352 IPR035669 -
Pvu11g1217 357 Gene3D SGNH hydrolase 25 352 IPR036514 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1217 Pvu-Chr11 19019417 19022405 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1217 9 356 Pollen Coat Proteome AT1G75910 36.158 1.70e-68 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1217 - - gmx:100808475 540.421
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1217 11 19019417 19022405 Pvu11g1217 11 19019417 19022405 ECH