Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1211 ATGGGTGCTCTTCAGTCTACACTTCTCTACTTGATTTTACTACACTCATGCAGGATTGTTGCTTACAGTAACCAAGAGTGGAAGAAAGCCACTGCAACGTATGCCAAAGACTCAGAGGGGTCTCTTGTCACCGAAGGAGCTTGTGGTTATGGAGATCTCCACAAGGAAAGTTATGGGAAACACAGTGCTGGCTTAAGCACCATGTTGTTCAACAGAGGGAGCACATGTGGTGCCTGCTATGAGATTAGATGTGTTGACCACATCTTGTGGTGTGTGATGGGAAGCCCTTCTGTAGTTGTTACTGTTACAGATTTCTGTGCTCCAAATTATGGGCTTTCAGTTGATTATGGTGGCTGGTGCAATTTTCCAAGAGAACATTTTGAGATGTCAAAGACTGCATTTGCTGAAATTGCCAAGAATAAAGCTGATATAGTGCCGGTTCAGTATAGAAGAGTAAAGTGTGAAAGAAGTGGTGGCGTGAGATTCACAATGAGTGGGGGTTCTCACTTCTATCAAGTGCTGATTTCCAATGTTGGTGTGGATGGTGAAGTGATTGCTGTGAAAGTGAAGGGGTCTAGAACAGGATGGATACCAATGGCAAGGAACTGGGGACAAAACTGGCACTGCAATGTCAACTTTCAGAATCAGCCTTTGTCCTTTGAGGTAACAATCAGTGGTGGAAAAACACTCACATCTTACAATGTAGCACCCGCAAAGTGGATGTTAGGACAGACATTTGAAGGAAAACAGTTTCAGGATGAGTAG 765 0.4392 MGALQSTLLYLILLHSCRIVAYSNQEWKKATATYAKDSEGSLVTEGACGYGDLHKESYGKHSAGLSTMLFNRGSTCGACYEIRCVDHILWCVMGSPSVVVTVTDFCAPNYGLSVDYGGWCNFPREHFEMSKTAFAEIAKNKADIVPVQYRRVKCERSGGVRFTMSGGSHFYQVLISNVGVDGEVIAVKVKGSRTGWIPMARNWGQNWHCNVNFQNQPLSFEVTISGGKTLTSYNVAPAKWMLGQTFEGKQFQDE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1211 254 Gene3D - 159 251 IPR036749 -
Pvu11g1211 254 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 45 159 IPR007112 -
Pvu11g1211 254 Pfam Expansin C-terminal domain 160 237 IPR007117 -
Pvu11g1211 254 SMART dpbb_1 62 149 IPR007112 -
Pvu11g1211 254 PANTHER EXPANSIN-A15 3 251 IPR002963 GO:0009664
Pvu11g1211 254 Gene3D - 14 155 IPR036908 -
Pvu11g1211 254 SUPERFAMILY PHL pollen allergen 156 248 IPR036749 -
Pvu11g1211 254 Pfam Lytic transglycolase 63 149 IPR009009 -
Pvu11g1211 254 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 169 248 IPR007117 -
Pvu11g1211 254 PRINTS Expansin signature 57 71 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 84 95 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 98 108 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 117 134 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 134 147 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 158 170 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 170 191 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 205 226 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin signature 234 250 IPR002963 GO:0009664
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 26 41 IPR007118 GO:0005576
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 44 62 IPR007118 GO:0005576
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 142 158 IPR007118 GO:0005576
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 196 210 IPR007118 GO:0005576
Pvu11g1211 254 PRINTS Expansin/Lol pI family signature 234 248 IPR007118 GO:0005576
Pvu11g1211 254 PANTHER EXPANSIN-A20 3 251 - -
Pvu11g1211 254 SUPERFAMILY Barwin-like endoglucanases 26 177 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1211 Pvu-Chr11 18655713 18657045 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1211 9 252 Expansin Gene Family AT4G38210 62.753 2.22e-118 337
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1211 - - gmx:100804002 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1211 11 18655713 18657045 Pvu11g1211 11 18655713 18657045 ECH