Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1193 ATGGACTCTTCTCCAACTCCCCTACCATCAATGTCTTCACTTTCCAGAAACTTTTTGCCAGGAGATTCCTTTTACAAGAAGTTAAGTTTTATTAATCGGTTTGTTATAGTCGTCCTCTTGGCCATCCTATTCTTCATCGTACTCGTATATTTTTACCTTCGATATTCCTCCTCATCCGACCCCGAGTCCGACGACATCCATGGACAAGAGGCGTTGAGGTCTTCGGCAGTGGTGACGGTGGTGGCAGAGACTGCTGGAGAATGCCCTATATATTTGAAGGAGATGGGAGAGGGAGAGCTCGTGAAAATGATTGCGTACTGCAGGCATATATTTCACGTAGAATGCATTGACAAGTGGCTGGAGACCAAGGTCATGTGCCCCATATGCCGATATTGCGAGACGAGTGCAAAGGTGGAGTTGCTGACAGTGTGA 432 0.4676 MDSSPTPLPSMSSLSRNFLPGDSFYKKLSFINRFVIVVLLAILFFIVLVYFYLRYSSSSDPESDDIHGQEALRSSAVVTVVAETAGECPIYLKEMGEGELVKMIAYCRHIFHVECIDKWLETKVMCPICRYCETSAKVELLTV* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1193 143 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 33 132 - -
Pvu11g1193 143 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 33 132 IPR044675 -
Pvu11g1193 143 ProSiteProfiles Zinc finger RING-type profile. 88 130 IPR001841 -
Pvu11g1193 143 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 136 IPR013083 -
Pvu11g1193 143 Pfam RING-H2 zinc finger domain 90 130 IPR024766 GO:0008270
Pvu11g1193 143 SUPERFAMILY RING/U-box 87 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1193 Pvu-Chr11 17773436 17773867 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1193 25 130 Rapid Response to Elicitors AT3G05200 29.771 9.59e-14 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1193 - K19040 pvu:PHAVU_011G115900g 268.855