Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1192 TTAAGTTTTAGTAATCGGTTTATTATAGTCGTCCTCTTGGCCATCCTATTCTTTTTCGTACTCGTATATTTTTACCTCCGATATTCCTCCTCATCCGACCCCGAGTCCGACGACATCCATGGACAAGCGACATTGAGGTCTCTGGCAGTGGTGACGGTGGTGGCAAAGACTGCTGGAGAATGCCCTATATGTTTGAAGGAGGTTGGAGAGGGAGAGCCCGTGAAAATGATTGCATACTGCAAGCATTTATTTCATGCGGAATCCATTGACAAGTGGCTGGAGACCAAGGTCATGTGCCCCATATGC 306 0.4706 LSFSNRFIIVVLLAILFFFVLVYFYLRYSSSSDPESDDIHGQATLRSLAVVTVVAKTAGECPICLKEVGEGEPVKMIAYCKHLFHAESIDKWLETKVMCPIC 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1192 102 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 7 102 - -
Pvu11g1192 102 ProSiteProfiles Zinc finger RING-type profile. 61 102 IPR001841 -
Pvu11g1192 102 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 27 102 IPR013083 -
Pvu11g1192 102 SUPERFAMILY RING/U-box 60 102 - -
Pvu11g1192 102 SMART ring_2 61 102 IPR001841 -
Pvu11g1192 102 Pfam Ring finger domain 60 102 IPR001841 -
Pvu11g1192 102 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 7 102 IPR044675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1192 Pvu-Chr11 17759673 17759978 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1192 1 102 Rapid Response to Elicitors AT3G05200 31.496 1.28e-13 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1192 - K19038 pvu:PHAVU_011G115800g 184.111