Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1180 ATGTCTGTAAGTGTCAAAAGTTTTTTCTTACTTTTCCTGCTTGTGCTTGTGCAACCTTCAACAAGCATTTCTTTTGGTCCTGATGCAAGAGTAACTGTGATTGTTGAAAATGAATTACAAGGAGGTCAAGACCTGTTGATGCACTGCGTATCTGCTGACAATGATCTTGGTGTGAAACTTATTCATCCTAATACTTCTTATCATTGGAAATTCCATATTAATGTCTTTGGAAAAACGTTGTACCATTGTTCCTTTCAATGGGCATTCGTCTTGCATAAGTTTGTTATTTACGAAACAAGCAGGGATCATAGCTTATGTCACATCTGCAGTTGGGTAGTCAAAGAAGATGGACCATGTTTGGTTTTTGATGAGAAAAGTGATTGCTATACTTGGAATAGTTTAGAAGAAAGATATATCCCTTTCTTATTCTAA 432 0.3588 MSVSVKSFFLLFLLVLVQPSTSISFGPDARVTVIVENELQGGQDLLMHCVSADNDLGVKLIHPNTSYHWKFHINVFGKTLYHCSFQWAFVLHKFVIYETSRDHSLCHICSWVVKEDGPCLVFDEKSDCYTWNSLEERYIPFLF* 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1180 143 Pfam Plant self-incompatibility protein S1 32 131 IPR010264 -
Pvu11g1180 143 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 13 131 - -
Pvu11g1180 143 PANTHER - 13 131 IPR010264 -
Pvu11g1180 143 SUPERFAMILY Cupredoxins 21 88 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1180 Pvu-Chr11 16267986 16268417 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1180 19 133 Carbohydrate Esterase AT3G16970 37.398 4.73e-22 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1180 - - pvu:PHAVU_011G171900g 162.155