Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1171 ATGGCGTCTGGATCATCGGGTCGCGGAAACTCTGGTTCCAAAGGGTTTGATTTCGGTTCCGATGATATCCTCTGCTCCTACGATGACTACGCCAACCGCGATTCCAGTTCCAACGGCAATCACGCGGATCCGGATTTTCACAAAGCAAGGATGTCTAGGACATCAATGTTTCCTACTACTGCCTATAATCCACCTGAAGATTCTTTAAGCCAAGATGTCATTGCGACTGTAGAGAAGAGTATGAAAAAATATGCTGACAACCTCATGCGTTTTCTGGAGGGAATTAGTTCAAGGCTATCACAGTTGGAATTATACTGTTACAATCTTGACAAATCTATTGGAGAAATGAGATCAGATTTAACTCGTGACAATGTGGAGCAAGATTCAAGGCTGAAATCTCTTGAAAAGCACCTTCAAGAAGTTCACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTGGCTGAGACTCAGAAAGAATTAGCCAAGCTTCAACATGCTCAGAAAGAATCATCTTCCTCCAGCCATTCACAGTCCAATGAGGAGAGATCATCACCAACCACAGATCCTAAAAAAACTGACAATGCATCTGAATCAAACAACCAGCAGTTGGCTCTTGCTCTACCTCATCAAATTGCCCCTCATCAGCAGCCTGCAGCGCCTCCTGCTCAGGCTCAGGCACCTGCACCTGCTCAGACTCAAGCCCCTCAGCAGCCTCCTTATTACATGCCTCCCACCCCTCTGCAGAATACACCTGTGGCACAGCTTCCCCAGAACCAGTATTTACCTTCTGAACAACAATATCGAACTCCCCAACTTGTGGCCCCACAACCAACACCATCTCAAGTAACGCCATCCCCACCTGTGCAACAATTTTCTCACTATCAGCAGCAACAGCAACAGCCACAACAGCAGCAGCTCCAGCAACAACAGCCACAACAGCAGCAGCTCCAGCAGCAATGGTCACAGCAGGTGCCATCACCTCAGCCACCCTCAATGCAATCTCAAACAAGACCCCCTTCTCCAGCTATGTACCCTCCATACCAGCCAAACCAAGCATCAAACCCATCAGCTGCAGAAACTCTACCGAACAGCATGCCCATGCAAGGGCCATATTCAGGAGTTCCACCACCGGGATCTAGCCGTCCTGACACAATACCCTATGGCTATGGAGGATCTGGAAGAACAGTTCCACAGCAGCCTCCACCCCAGCAGATGAAGAGTTCTTTTCCTGCACCACCAGGTGAAATGTATGGACCTACTGGCTCTCTCGCAGCCCTTCCTCCCAGTAGTGCATACATGATGTATGAGGGTGAAGGAGGAAGAACACATCATCCACCACAACCTCATTTTACTCAACCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAACCCCCCAAGCCATAATCTTATGGTTCGAAATCCCAACCAGTCGCAGTTTGTCCGCAACCATCCCTACAGTGAGTTGATTGAGAAATTGGTGAGCATGGGATTCAGGGGTGACCATGTTATGAGTGTGATCCAGAGGATGGAGGAGAGTGGACAGGCCATTGATTTCAATTCGGTACTTGACAGGTTGAATGTGCATAGCTCTGTGGGTCCTCCGAGGGGATGGTCAGGGTGA 1626 0.4865 MASGSSGRGNSGSKGFDFGSDDILCSYDDYANRDSSSNGNHADPDFHKARMSRTSMFPTTAYNPPEDSLSQDVIATVEKSMKKYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLTRDNVEQDSRLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQHAQKESSSSSHSQSNEERSSPTTDPKKTDNASESNNQQLALALPHQIAPHQQPAAPPAQAQAPAPAQTQAPQQPPYYMPPTPLQNTPVAQLPQNQYLPSEQQYRTPQLVAPQPTPSQVTPSPPVQQFSHYQQQQQQPQQQQLQQQQPQQQQLQQQWSQQVPSPQPPSMQSQTRPPSPAMYPPYQPNQASNPSAAETLPNSMPMQGPYSGVPPPGSSRPDTIPYGYGGSGRTVPQQPPPQQMKSSFPAPPGEMYGPTGSLAALPPSSAYMMYEGEGGRTHHPPQPHFTQPGYPPTSASLQNPPSHNLMVRNPNQSQFVRNHPYSELIEKLVSMGFRGDHVMSVIQRMEESGQAIDFNSVLDRLNVHSSVGPPRGWSG* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1171 541 Pfam UBA-like domain (DUF1421) 487 531 IPR010820 -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 160 198 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 332 349 - -
Pvu11g1171 541 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 301 539 - -
Pvu11g1171 541 PANTHER FORMIN-LIKE PROTEIN (DUF1421) 1 315 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 213 253 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 233 251 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 455 470 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 167 198 - -
Pvu11g1171 541 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 1 315 - -
Pvu11g1171 541 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 301 539 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 350 368 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 286 331 - -
Pvu11g1171 541 MobiDBLite consensus disorder prediction 269 470 - -
Pvu11g1171 541 Coils Coil 131 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1171 Pvu-Chr11 15380181 15387017 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1171 486 527 Trihelix Transcription Factor Family AT3G01560 40.476 8.94e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1171 - - gmx:100782994 744.191