Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1165 ATGGGTTGTTGTGTGTCAACAAGCAGTAAAAGTACTTGTAGCAGCAAGAGTAATGGAGACACGGTCTCCCCGGCTTGTTTGGAAATTGGATTCTGTGGGCAGAAGAGAACAAGACGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTCTCTAATGGAAAGAGCCGGGGTTCTTGCATCTTTACGCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTTTTTGATGGTCATGGTCCGCACGGTCATCTTGTTGCACGCAAAGTTAGGGATGCCTTACCGGTTAAACTGCTGTCATTTTTGCATTCTTCTGAATCAAAGCGTAGCGGGTCTGGTAAAACTTGCTTCAAAGGGAATGTAAAACCTGATAGTGTAGAATTTGAGAAGGATTGCTCCACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAGTCATACAAGGCTATGGACAAAGAACTTAGGTCTCATCCAAATTTGGATTGCTTCTGTAGTGGGAGCACTGCTGTGACTATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGGGATTCTCGGGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACTGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAACGCTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCGGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCATTTGGAGATTTCTGCTTGAAGGATTATGGTGTGATTTCTATACCTGAATTTTCCCATCGGCAGCTTACAGACAGAGATCAATTCATTGTTCTTGCCTCTGATGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCTTCTGCACCAACACGATCATCAGCGGCAAGGATTCTGGTAGATTCTGCTGCTAGGGAATGGAAACTTAAATACCCTACTTCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCAGGTAACCCCATTGAGTCAGATGATGGACAAAAATCTGAGCCATCATTGCAGAGGAACTTCACTGTAAGATCCTCAGAAGAAAATGAGACTAATGGAGCACTAACTGTTGATGTCGAAGATGGAACAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1407 0.4364 MGCCVSTSSKSTCSSKSNGDTVSPACLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSSESKRSGSGKTCFKGNVKPDSVEFEKDCSTEDKMNSMWREAFMKSYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKDYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALTVDVEDGTADDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1165 468 Gene3D - 58 378 IPR036457 -
Pvu11g1165 468 SMART PP2C_4 50 368 IPR001932 -
Pvu11g1165 468 PANTHER PROTEIN PHOSPHATASE 2C 52-RELATED 1 456 - -
Pvu11g1165 468 MobiDBLite consensus disorder prediction 1 20 - -
Pvu11g1165 468 MobiDBLite consensus disorder prediction 381 427 - -
Pvu11g1165 468 CDD PP2Cc 65 370 IPR001932 -
Pvu11g1165 468 SUPERFAMILY PP2C-like 57 372 IPR036457 -
Pvu11g1165 468 MobiDBLite consensus disorder prediction 380 445 - -
Pvu11g1165 468 ProSiteProfiles PPM-type phosphatase domain profile. 66 370 IPR001932 -
Pvu11g1165 468 PANTHER ALPHABET, ISOFORM E-RELATED 1 456 - -
Pvu11g1165 468 Pfam Protein phosphatase 2C 95 347 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1165 Pvu-Chr11 15078978 15083189 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1165 1 468 PP2C-type Phosphatase Gene Family AT1G03590 70.921 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1165 - - gmx:100813306 889.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1165 11 15078978 15083189 Pvu11g1165 11 15078978 15083189 ECH
Pvu5g1100 5 31314803 31319286 Pvu11g1165 11 15078978 15083189 PCT