Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1159 ATGGATTGGAAGAGATCTGCTTTGGAGTGCCAGAGAGTAAAGATCTGCAGACAAGTTCTGTTGGGATTTTTGTTGATCTGCACAATTCACACTTCAAGTGCTGTCACCGATCCCACTGATGTTGCTGCAATTAATAGCTTCTATATTGCACTGGGATCCCCTGTTCTGCCTGGGTGGGTTGGTAGTGGAGGAGATCCATGTGGAGAAGGGTGGCAAGGCATTCTGTGTAATGGGTCATTCATACAAAAAATAGTTCTGAATGGTGCAAATTTGGGAGGAGAACTGGGAGATAAACTGTCAACTTTTGTTTCAATCTCAGTGATTGATCTAAGCAACAACAACATTGGAGGAAATATTCCATCTAATTTGCCAGTTACCATGAAAAACTTTTTTCTTTCAGACAACCAGTTTACTGGAAGTATTCCAACCTCTTTGTCCACTTTGGCTGGACTGACAGATATGTCTCTTAACTACAATTTCTTAACTGGAGCAATACCAGATGCTTTTCAGTCACTTACGCAGTTGATCAATCTTGATTTATCTCATAATAATTTGAGTGGGGAATTGCCTTCTTCCATGGATAACTTGTCGTCTCTGACCACCCTACGCCTACAAAACAATCAATTGTCCGGGACACTTGATGTCTTACAAGACCTTCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTTCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCAGCCTTCAGGCAAGCTGGAAACCCATTTAATGTTAGTGGCACAACAACTCCTGCTTCTTCACCTCGCTCCCCAGCAATAGCACCACCTGGAACTCCTATTTCTGGTGCACCACCTGGAACTCCCACCTCTGGGGCACCACCATCTTCTGGCCGTGTACCTACTAAGCAGGCTGATGGACCAGCTGTAGCAAATGAATCACACTCTGGGAAATCCAAACAATCCACAAAAAGGGTGGTTTGGATATCTATTGGTAGTGTGTTGGGATTCATTATTTTGTTACTAGGATTCATTCTCTTTATTCCAAGATGCAGCAGAAGAGAACGAGATGGTAGAAGGTCCAAGCAACGCCAAATTGGTGCATATGGGGCTGAAAGGGAAATTGCCAGGGATAACGGAAATTCAGTCCAACCACCTAGTCAAACGGAAAAAGTACCAGTAGGGGATGCTCCAAGACCAAAAGAGGGTCGTCAGGCAGAGACTAGGACAGTCTGGGCTAATCCAAGGCCAAAAGAGGGTCATCAGGCAGAGACCAGGACAGTCAGGGCTAATCCAAATCCACAGAGTGAGCAAGAGAAGGATGTGCAGAGAATGGCTACAATACCAAAGCCAGGAGAGCATGAGATAGATATTAGTGCACTACAAGTATATTCAATGCCTCCTCCCCCTCCCCCACCTCCCCCACCACCCCCTCCCCCTCCCCCTTCTACTACTGAAAAGGTGACTGTTGAGCCAGGCACATCCCGCAGAGCAACTAATGTCACTCCACTCATGAGAAGTTCAGTTCCTCCTACTTTTGCAAAATTTTTTGCTATTGCATCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATAGGAGGAGGCATGTTGGGTAATGTGTATAGAGCCGAACTTCCTAATGGCAAGTTACTTGCTGTAAAGAAACTGGACAAGAGAGCTTCTGATAACCAGAAGGATGATGAATTTCTTGAATTGATTAATAGTATTGATAGAATAAGGCATGCAAATGTTGTCGAGCTTGTTGGATACTGTTCCGAGCATGGTCAAAGGCTTCTTATATATGAGTACTGCAGTAATGGGTCACTGTATGATGCACTCCACTCAGATGATGACTTCAAAACAAGACTATCATGGAATGCTCGAATTCGAATAGCTCTTGGGGCAGCCAGAGCTTTAGAATATCTGCATGAGCAATGTCAGCCACCTGTAGTACACAGAAATTTGAAGTCTGCCAATATTCTGCTTGATGATGATCTATCCATCCGGGTCTCTGATTGTGGTTTAGCTACATTGATAGCTTCAGGATCAGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATATACACATACCAAAGTGACGTGTACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCAGTCCCACGACAGGACACGTCAACGCGGGGAGCAATTTCTGGCCAGATGGGCAATTCCCCAACTTCATGATATTGATGCCTTATCGAGCATGGTCGATCCTTCTTTGAATGGAAATTACCCAGCAAAATCACTGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCAGAGCCAGAATTTAGGCCAGCAATGTCCGAGGTTGTCCTATACTTACTAAATATGATAAGGAGGGAGTCTCAGCAAAGTGAATCAAATGAAAAATGA 2445 0.4405 MDWKRSALECQRVKICRQVLLGFLLICTIHTSSAVTDPTDVAAINSFYIALGSPVLPGWVGSGGDPCGEGWQGILCNGSFIQKIVLNGANLGGELGDKLSTFVSISVIDLSNNNIGGNIPSNLPVTMKNFFLSDNQFTGSIPTSLSTLAGLTDMSLNYNFLTGAIPDAFQSLTQLINLDLSHNNLSGELPSSMDNLSSLTTLRLQNNQLSGTLDVLQDLPLKDLNIENNQFSGPIPPKLLSIPAFRQAGNPFNVSGTTTPASSPRSPAIAPPGTPISGAPPGTPTSGAPPSSGRVPTKQADGPAVANESHSGKSKQSTKRVVWISIGSVLGFIILLLGFILFIPRCSRRERDGRRSKQRQIGAYGAEREIARDNGNSVQPPSQTEKVPVGDAPRPKEGRQAETRTVWANPRPKEGHQAETRTVRANPNPQSEQEKDVQRMATIPKPGEHEIDISALQVYSMPPPPPPPPPPPPPPPPSTTEKVTVEPGTSRRATNVTPLMRSSVPPTFAKFFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKLLAVKKLDKRASDNQKDDEFLELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKTRLSWNARIRIALGAARALEYLHEQCQPPVVHRNLKSANILLDDDLSIRVSDCGLATLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRTRQRGEQFLARWAIPQLHDIDALSSMVDPSLNGNYPAKSLSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRRESQQSESNEK* 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1159 814 Pfam Protein tyrosine and serine/threonine kinase 527 796 IPR001245 GO:0004672|GO:0006468
Pvu11g1159 814 Gene3D Transferase(Phosphotransferase) domain 1 602 814 - -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 459 481 - -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 265 287 - -
Pvu11g1159 814 SUPERFAMILY Formin homology 2 domain (FH2 domain) 467 473 - -
Pvu11g1159 814 SUPERFAMILY L domain-like 62 242 - -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 251 318 - -
Pvu11g1159 814 Pfam Leucine rich repeat N-terminal domain 38 77 IPR013210 -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 349 439 - -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 421 437 - -
Pvu11g1159 814 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 1-RELATED 25 813 - -
Pvu11g1159 814 ProSiteProfiles Leucine-rich repeat profile. 198 220 IPR001611 GO:0005515
Pvu11g1159 814 SUPERFAMILY Protein kinase-like (PK-like) 498 798 IPR011009 -
Pvu11g1159 814 MobiDBLite consensus disorder prediction 458 495 - -
Pvu11g1159 814 ProSiteProfiles Protein kinase domain profile. 524 798 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu11g1159 814 Gene3D Phosphorylase Kinase; domain 1 488 601 - -
Pvu11g1159 814 PANTHER OS01G0253100 PROTEIN 25 813 IPR045271 GO:0004714|GO:0006468
Pvu11g1159 814 Gene3D Ribonuclease Inhibitor 38 259 IPR032675 -
Pvu11g1159 814 Pfam Leucine rich repeat 128 185 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1159 Pvu-Chr11 14804214 14815268 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1159 32 809 Strubbelig Receptor Gene Family AT4G03390 60.936 0.0 863
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pvu11g1159 PK_Tyr_Ser-Thr 7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1159 - - mtr:MTR_4g046113 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu5g1107 5 31430964 31437424 Pvu11g1159 11 14804214 14815268 PCT