Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu11g1145 ATGACGGTTGCTTCCTTCTTCAAGAGGGCCTCCAGGGTTCTCAGCTCGTCCCGTTTTCTGCTGGTCTGCACTCTCAGTGGTGGTGGTGTGGTGGCATTCTCAGAATCACAAACAGGAGCTGAACGTCCTAGTATTGAGGCTAATGGGCCCTCCAAGAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGATGCTTCATTATATGATGTTCAGGTTGTTTCACCTCGTAATTACTTTGCATTTACTCCCTTATTACCTAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTAGAGCCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAATAAACTTTTGGGAAGCAGAATGTGTCAAGATTGATTCTTCCAACAAAAAGGTTTTCTGTCGGTCCAATATTGACAACTTGGTGGGAAGTGGCGAATTTTCCTTGGACTATGATTTCTTGGTTGTAGCGGTAGGAGCACAAGTAAATACATTTAACACCCCTGGTGTCAAGGAGAACTGTCATTTTCTGAAGGATGTTGAGGATGCTCAGAAGATTAGACTGTCTGTTATTGATTGCTTTGAGAAAGCTGTTCTTCCTAGTATAACTGATGAAGAGCGAAGGTCAATTCTTCATTTTGTAGTAGTGGGAGGAGGTCCAACTGGTGTAGAATTTGCTGCAGAACTGCATGATTATGTCCTAGAAGATTTAATCAAACTATATCCCACTGCTAAAGATAAAGTGAAAATAACACTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGCAAAAATTTACAAGAGATGGGATAGAAGTTGAAACAGGATGCCGCGTTGTTGGTGTTGATGACAAGGTAATTACAATGAAGACAAAATCAACAGGAGACATTTGCTCGGTGCCCCATGGATTGGTTGTCTGGTCAACTGGCATTTCAACTCTTCCAGTTATAAGGGACTTTATGAAGGAAATTGGTCAGGCTGAAAGGCATGTACTAGCAACTAATGAGTGGTTGCGTGTGAAGGGACGTGAAGATGTTTATGCCATTGGTGATTGTTCTAGCATAACTCAACGTAAAATCATGGACGATATCACAACCATATTTGAGGCTGCAGACAAAAATAAGTCAGGCACCTTGACTATTGAAGAATTCCAGGAGGTGATGGATGACATTATATTACGATATCCGCAAGTTGAACACTATCTAAAGCAGAAACATCTGCGTGATTTTAGCACTCTGTGGAAAGATTTGCAAGGGAATGAAAGCAAGGAAATAGACGTTGAAGCATTTAAGCTGGCGCTTTCTCATGCAGATTCACAGGTGAAGAGTCTGCCAGCAACTGCACAGGTTGCTGCCCAACAGGGTGCATATCTAGCTAGATGCTTTAACCATAGGGATCATGCTGAAGAGCATCCTGAAGGTCCTCGACGATTTAGCGGATCTGGACGCCATAAGTTTCTTCCCTTCCGGTATAAGCATTTTGGTCAATTTGCTCCACTGGGTGGTGAGCAGGCAGCTGCAGAACTACCTGGAGATTGGGTTTCCATGGGTCACAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGCAAGCAAGTGAGCTGGCGAACAAGGGTTTTGGTCATGTCTGATTGGACAAGAAGATTCATATTTGGCAGGGATTCAAGTCGGGTTTAA 1722 0.4297 MTVASFFKRASRVLSSSRFLLVCTLSGGGVVAFSESQTGAERPSIEANGPSKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEINFWEAECVKIDSSNKKVFCRSNIDNLVGSGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSITDEERRSILHFVVVGGGPTGVEFAAELHDYVLEDLIKLYPTAKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVETGCRVVGVDDKVITMKTKSTGDICSVPHGLVVWSTGISTLPVIRDFMKEIGQAERHVLATNEWLRVKGREDVYAIGDCSSITQRKIMDDITTIFEAADKNKSGTLTIEEFQEVMDDIILRYPQVEHYLKQKHLRDFSTLWKDLQGNESKEIDVEAFKLALSHADSQVKSLPATAQVAAQQGAYLARCFNHRDHAEEHPEGPRRFSGSGRHKFLPFRYKHFGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYASKQVSWRTRVLVMSDWTRRFIFGRDSSRV* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu11g1145 573 ProSiteProfiles EF-hand calcium-binding domain profile. 374 409 IPR002048 GO:0005509
Pvu11g1145 573 PANTHER NADH DEHYDROGENASE 51 573 IPR045024 GO:0003954|GO:0006116
Pvu11g1145 573 SMART efh_1 378 406 IPR002048 GO:0005509
Pvu11g1145 573 SUPERFAMILY FAD/NAD(P)-binding domain 218 371 IPR036188 -
Pvu11g1145 573 Pfam Pyridine nucleotide-disulphide oxidoreductase 53 374 IPR023753 GO:0016491
Pvu11g1145 573 SUPERFAMILY FAD/NAD(P)-binding domain 52 270 IPR036188 -
Pvu11g1145 573 ProSitePatterns EF-hand calcium-binding domain. 387 399 IPR018247 -
Pvu11g1145 573 PANTHER EXTERNAL ALTERNATIVE NAD(P)H-UBIQUINONE OXIDOREDUCTASE B1, MITOCHONDRIAL 51 573 - -
Pvu11g1145 573 Gene3D - 43 431 - -
Pvu11g1145 573 Gene3D - 435 573 - -
Pvu11g1145 573 SUPERFAMILY EF-hand 328 452 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu11g1145 Pvu-Chr11 14478133 14487078 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu11g1145 1 573 Chloroplast and Mitochondria Gene Families AT4G21490 62.799 0.0 741
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu11g1145 K03885 - gmx:100793566 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu11g1145 11 14478133 14487078 Pvu11g1145 11 14478133 14487078 ECH